Pseudomonas alvandae B21-020: LOY40_07830
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Entry
LOY40_07830 CDS
T08625
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas00020
Citrate cycle (TCA cycle)
pcas00190
Oxidative phosphorylation
pcas00650
Butanoate metabolism
pcas00720
Other carbon fixation pathways
pcas01100
Metabolic pathways
pcas01110
Biosynthesis of secondary metabolites
pcas01120
Microbial metabolism in diverse environments
pcas01200
Carbon metabolism
Module
pcas_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pcas_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pcas_M00149
Succinate dehydrogenase, prokaryotes
pcas_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LOY40_07830 (sdhA)
00650 Butanoate metabolism
LOY40_07830 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LOY40_07830 (sdhA)
00720 Other carbon fixation pathways
LOY40_07830 (sdhA)
Enzymes [BR:
pcas01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LOY40_07830 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
GIDA
Thi4
FAD_binding_3
FAD_oxidored
Pyr_redox_3
FUSC
Motif
Other DBs
NCBI-ProteinID:
UVM74053
LinkDB
All DBs
Position
1743668..1745440
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AA seq
590 aa
AA seq
DB search
MANIPTISFDAIIIGGGGAGMRAALQLAQGGHKTAVITKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGMPFSRTEQGRIYQRP
FGGQSKDYGKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEYYAVDLVKNQDGAF
VGVIAICIETGETTYIRAKATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKEI
IAGNGCGPNGDHVMLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMMG
GVATNIHGQAMTQNAEGVDEIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALSDGIEYDDATDANIETALARLSALNERTEGEDVATLRRELQNCMQNYFGVFRTGE
YMQKGIAQLAQLRERIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEVRKESRG
AHAREDFEDRDDENWLCHTLYFPGEKRVAKRAVNFSPKTVPTFEPKVRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctaacattccaacgatttctttcgacgccatcattattggtggtggcggtgccggc
atgcgcgctgcgctgcaactggcacagggcggtcacaagactgccgtgatcaccaaggtt
ttcccgacgcgttcgcacacggtttccgcccagggtggcatcacctgcgccatcgcttcg
gccgacccgaacgatgactggcgctggcacatgtacgataccgtcaagggttccgactac
atcggtgaccaggacgctatcgaatacatgtgtcaggaaggcccggccgcggtgttcgag
ttggaccacatgggcatgccattctcccgtaccgagcaaggtcgcatctaccagcgtccg
ttcggtggccagtccaaggactacggcaagggcggccaggctgcgcgtacttgcgcggcg
tccgaccgtaccggtcacgccctgctgcacaccctttatcagggcaacctgaaagccggt
accacgttcctgaacgagtactacgccgttgacctggtgaagaaccaggacggcgcgttc
gtcggtgtgatcgcgatctgcatcgaaactggcgaaaccacctacatccgcgccaaggcc
accgtactggcgaccggcggtgcgggccgtatctacgcatccaccaccaatgccctgatc
aacaccggtgacggcgtcggcatggccctgcgtgctggcgtgccggtacaagacatcgaa
atgtggcagttccacccgaccggcatcgccggcgccggtgtactggtcaccgaaggttgc
cgtggtgaaggcggttacctgatcaacaagcacggcgagcgtttcatggaacgttatgcg
ccgaacgccaaggaccttgctggtcgtgacgtcgtggctcgttcgatggttaaagagatc
atcgccggcaacggctgtggcccgaatggcgaccacgtgatgctcaagctcgatcacctt
ggcgaggaagtgctgcacagccgcctgccaggtatctgcgaactgtccaagaccttcgct
cacgtcgatcctgttgtcgcgccggttccagtggttccaacctgccactatatgatgggc
ggcgttgccaccaacattcatggccaggcaatgacccagaacgccgaaggcgtggacgaa
atcatccctggcctgttcgcggtgggtgaagtggcttgcgtatcggtccacggtgccaac
cgcctgggcggcaactcgctgctcgacctggtggtcttcggtcgcgccgccggcctgcac
ctggagaaagcgctgtccgacggtatcgaatacgacgatgccaccgacgccaacatcgaa
accgccctggcgcgcctgtctgctctgaacgagcgtaccgaaggcgaagacgtggcaacc
ctgcgtcgcgagttgcaaaactgcatgcagaactacttcggtgtgttccgtaccggcgaa
tacatgcagaagggtattgcccagctcgcacaattgcgtgaacgaatcgccaacgtgaag
atcaacgataagtcgcaggcgttcaacactgcccgtatcgaagcgctggaattgcagaac
ctgctggaagtggccgaagccaccgccatcgccgcagaagtgcgcaaagagtcccgtggt
gcccacgcccgcgaagacttcgaagaccgtgacgacgaaaactggctgtgccacaccttg
tacttcccgggtgaaaaacgcgtcgccaagcgtgccgtgaacttctcgccgaagactgtt
ccgactttcgaaccaaaagtccggacttattaa
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