Pseudomonas alvandae B21-020: LOY40_08510
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Entry
LOY40_08510 CDS
T08625
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas00071
Fatty acid degradation
pcas00280
Valine, leucine and isoleucine degradation
pcas00310
Lysine degradation
pcas00362
Benzoate degradation
pcas00380
Tryptophan metabolism
pcas00410
beta-Alanine metabolism
pcas00640
Propanoate metabolism
pcas00650
Butanoate metabolism
pcas00907
Pinene, camphor and geraniol degradation
pcas00930
Caprolactam degradation
pcas01100
Metabolic pathways
pcas01110
Biosynthesis of secondary metabolites
pcas01120
Microbial metabolism in diverse environments
pcas01200
Carbon metabolism
pcas01212
Fatty acid metabolism
Module
pcas_M00087
beta-Oxidation
pcas_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LOY40_08510
00650 Butanoate metabolism
LOY40_08510
09103 Lipid metabolism
00071 Fatty acid degradation
LOY40_08510
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LOY40_08510
00310 Lysine degradation
LOY40_08510
00380 Tryptophan metabolism
LOY40_08510
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LOY40_08510
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LOY40_08510
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LOY40_08510
00930 Caprolactam degradation
LOY40_08510
Enzymes [BR:
pcas01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LOY40_08510
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LOY40_08510
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LOY40_08510
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
UDPG_MGDP_dh_N
AlaDh_PNT_C
F420_oxidored
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
UVM74181
LinkDB
All DBs
Position
1878987..1881128
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AA seq
713 aa
AA seq
DB search
MTDAIRYETGPDRIVVLTLDMPGQSANTMNAMYREAMAACVARLAVEKDSIAGVIITSAK
QTFFAGGDLNELIQVGPSQAKAFYETVLGLKAQLRTLETLGKPVVAAINGAALGGGWEIC
LACHHRVALDHPSVLIGLPEVTLGLLPGGGGVVRMVRLLGLEKALPYLLEGKRIRPQQAL
QAGLIDELAADRDDLLTKARAWILANPSVVQPWDTKGYRIPGGTPSDPAVAQTLAIAPSI
LRSKTQGCLPAPEKILCAAVEGAQVTFDAAHLIETRYFTELVTGQVAKNLIGTFWFQLNE
IKAGGSRPHGFAPFLTRKVAVLGAGMMGAGIAHVSAAAGIDVVLKDIDLAAAQKAKARCA
TLLDKQVARGQLTAAQRDATLARIHPTDSDADLTGCELIIEAVFEDRALKANVTAAAQAV
AGPDAVIASNTSTLPITGLAKAIPDESKFIGLHFFSPVEKMPLVEIIRGARTSDETLARG
FDFVRQIDKIPIVVNDSRGFFTSRVFGTFIHEGIAMLGEGVSAPMIETEAQKAGMPVGPL
AVSDEVALSLMSHIRKQTAQDLQAEGKAPTEHPAFAVIDLLLEYKRPGKAGGAGFYEYPE
QGQKYLWPVLKERFENTAGQIQAQDIRDRLLFIQALETVRCVEEGVVTSTADANIGSVLG
IGFASWTGGALQFINQYGLPAFIARCQYLAEQYGERFSPPALLLEKAARHARF
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgccattcgttacgaaaccggcccggaccggatcgtcgtcctgacgctggat
atgccaggccagagcgccaacaccatgaacgcgatgtaccgcgaggcgatggcggcctgc
gttgcgcgtctcgccgtcgagaaagactcgatcgccggcgtgatcatcacgtcggccaag
caaaccttttttgccggtggcgacctgaacgagctgattcaggtcggaccatcccaggcc
aaggccttctacgaaaccgtgctgggtctcaaggcacaactgcgcacactggaaaccctc
ggcaaaccggtggttgccgctatcaacggtgcggccctgggcggtggctgggaaatctgc
ctcgcgtgtcatcaccgcgtggcgctggatcacccgtcggtgctgatcggcctgccggaa
gtgacccttggcctgttgccgggcggcggtggcgtggtgcggatggtgcgcttgcttggt
ttggaaaaggcattgccgtatctgctcgaaggcaagcggattcgaccgcaacaagcactg
caggccggcctgatcgatgaactggcggcggaccgcgacgacctgcttaccaaggctcgc
gcctggattctcgccaacccgagcgtagtgcaaccttgggatacgaaaggctatcggatt
ccgggcgggacaccgtccgatcctgccgtcgcccagacgctggcgatcgcaccttcgatc
ctgcgcagcaagacccagggttgcctgccggccccggagaaaattctctgcgccgcagtg
gaaggggcgcaggtgacgtttgacgcggcccatctgatcgaaacccgttacttcaccgaa
ctggtgaccggccaggtggcgaagaacctgatcggcaccttctggtttcaactcaacgag
atcaaggctggcggttcccgcccacacggttttgcgccttttctgacaagaaaagtcgcg
gtgctcggcgccgggatgatgggggcgggtattgcccatgtcagtgctgcggcgggcata
gacgtggtgctcaaggacatcgacctggccgccgcgcaaaaagccaaggctcgttgcgcg
acgctgctggacaagcaagtcgcacgcggccagctcaccgctgctcagcgtgacgccacg
ttggcgcgaatccaccccaccgacagcgatgccgacctgaccggttgcgaattgatcatc
gaggcggtcttcgaggaccgtgccctgaaggccaacgtgaccgccgcagcccaagcggtg
gcggggcctgatgcggtgatcgcgtcgaatacgtcaacgctgcccatcaccggcctggcc
aaggccataccagatgaaagcaagtttatcggcctgcatttcttcagcccggtggaaaag
atgcccttggtcgaaatcatccggggggctcgtaccagcgatgagacgctggcccgaggc
ttcgatttcgttcggcaaatcgacaagattcccattgtcgtcaacgacagccgtgggttt
ttcacgtcgcgggtcttcggtaccttcatccatgaaggcatcgccatgctcggcgaaggc
gtgagtgcaccgatgatcgaaaccgaggcgcaaaaggccggtatgccggttgggccgttg
gctgtttccgacgaagttgccctcagcctgatgagccatatccgcaagcaaaccgcccaa
gacttacaagcggaagggaaagcgccgacggagcatcccgcattcgccgtgatcgacctg
ctgctcgaatacaagcgaccgggcaaggcgggcggggccggtttctacgagtatccagag
caagggcagaagtacctctggccggtgctcaaggagcgtttcgagaacaccgccgggcaa
atccaggctcaggatatacgtgaccgactgttattcatccaggccctggaaaccgttcgt
tgcgtggaggaaggcgtcgtcacttcgacggccgacgccaatatcggctcggtccttggc
atcggattcgcgtcttggacgggaggcgcgttgcagttcatcaaccagtacggcttgccg
gcatttatcgcccgctgccaatacttggccgaacaatatggcgaacgtttctcgccgccg
gccttgttgttggaaaaagccgccaggcacgcgcggttctga
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