Pseudomonas alvandae B21-020: LOY40_09070
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Entry
LOY40_09070 CDS
T08625
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcas03036
]
LOY40_09070 (smc)
Chromosome and associated proteins [BR:
pcas03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
LOY40_09070 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
SMC_hinge
AAA_29
DUF7491
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UVM74284
LinkDB
All DBs
Position
1995275..1998763
Genome browser
AA seq
1162 aa
AA seq
DB search
MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES
MTDVIFNGSTSRKPVSQASIELVFDNSDGTLIGEYAAYAEISIRRKVTRDSQNSYFLNGA
KCRRRDITDIFLGTGLGPRSYSIIEQGMISKLIEAKPEDLRNFIEEAAGISKYKERRRET
ENRIRRTHENLARLTDLREELERQLERLHRQAEAAKKYQEYKGEERQLKAQLSALRWQAL
DEQVGQREAIIGNQEVSFEALVAEQRNADAAIERLRDGHHELSERFNLVQGRFYSVGGDI
ARVEQSIQHGQQRLRQLQDDLKEAERARLETESHLGHDRTLLLTLGEELERLTPEQELTS
AAAEEAAAALEEAELTMHGWQEQWDSFNLTSAEPRRQAEVQQSRIQQLETSMERLAERQR
RQSEERALLAADPEDAAILELGEQLATSEATLEDLQASEDAQVERLEQLRQALQLALQNQ
QQAQGELQRLNGRLASLEALQQAALDPGTGTAEWLRDQHLAERPRLAEGLKVDAGWELAV
ETVLGADLQAVLVDDFAGFDLSGFSQGDLRLLSPAGDGVRVPGSLLDKVEAQVDLSPWLG
QVKPVDSLEQALALRGQLAAGESLISRDGYWVGRHFLRVRRASEAESGMLARGQEIQRLG
AEREEREASVEALETELQNLRAQQRQQENGREHLRRLLQDEARQQGELKAQLSAGKAKVE
QLALRRTRLDEEIAELGEQRALEHEQIGEARLQLQEALDAMALDTEQRELLLAQRDSLRE
RLDRVRQEARQHKDHAHQLAVRLGSLKAQYDSTRQALERLEMQSERLTEKREQLSLNLEE
GEAPLEELRLKLEELLDKRMSVDEELKTAQIALEDADRELRDAEKRRSQAEQQSQLIRGQ
MEQQRMEWQALTVRRKALQDQLLEDGYDLNGVLATLVAGANEKDAEEELERIAQRIQRLG
AINLAAIDEYQQQSERKRYLDAQNDDLVEALETLENVIRKIDKETRNRFKDTFDQINGGL
QALFPKVFGGGSAYLELTGEDLLDTGVTIMARPPGKKNSTIHLLSGGEKALTALALVFAI
FKLNPAPFCMLDEVDAPLDDANVGRYARLVKEMSETVQFIYITHNKIAMEMADQLMGVTM
HEPGCSRLVAVDVEEAMAMVDA
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcaagtgcatcaagctggcggggttcaaatccttcgtcgacccgaccacggtg
aacttccccagcaacatggcggcagtggtcgggcccaatggctgcggcaagtcgaacatc
atcgatgccgtgcgctgggtgatgggcgaaagctcggcgaagaacctgcggggcgagtcg
atgaccgacgtcatcttcaatggctccaccagtcgcaagccggtaagccaggcgagcatc
gagctggtgttcgataactctgacggcacgctgattggcgagtacgcggcctacgcggaa
atttccattcggcgcaaagtaacccgcgacagccagaacagttatttcctcaacggcgcc
aagtgccgacgtcgggacattaccgacatcttcctgggtaccggcctgggcccgcgcagc
tattcgatcatcgaacagggcatgatctccaagctgatcgaggccaagcccgaggacctg
cgcaatttcatcgaggaagccgccggaatctccaagtacaaggagcggcgccgcgagacc
gaaaaccgcatccgtcgaacccacgaaaacctcgcccgcctgaccgaccttcgcgaagaa
ctcgagcgccaactcgaacgcctgcaccgccaggccgaagccgcgaagaaataccaggaa
tacaaaggcgaggagcgccagctcaaggcccagctatcggccctgcgctggcaggcgttg
gacgagcaggttggccagcgcgaggcgatcattggcaaccaggaagtcagtttcgaagcg
ctggtggccgaacaacgcaacgccgatgccgccatcgagcgccttcgcgatggacaccac
gaactgtccgaacgcttcaatctggtgcaagggcgtttctattcggtgggcggtgacatt
gcccgggtcgaacaaagcatccagcacggtcagcaacgcttgcgccagttgcaggatgat
ttgaaggaagccgagcgcgcgcgcctggaaaccgaatcgcacctgggccatgaccgcacc
ttgttgctgacccttggtgaagaactggaacggctcaccccggagcaggaactcaccagc
gccgccgccgaagaggcggccgcagcgttggaggaagccgagctgaccatgcacggctgg
caggagcagtgggacagcttcaacctgacctccgccgagccacggcgccaggctgaagtc
cagcagtcgcgcatccagcaattggaaaccagcatggagcgcctggccgagcgtcaacgg
cgtcagtccgaagagcgtgcattgctcgcggcagatccggaggacgccgccatcctggag
ctgggcgagcaactcgccaccagcgaagccacgctcgaagacttgcaggccagcgaagac
gcccaggtcgaacgcctcgaacaactgcgccaagccttgcaactggccctgcagaaccag
caacaggcccagggcgaattgcagcgtctcaacggccgcctggcctcgttggaagccttg
caacaggcagcgttggacccgggcaccggcactgccgaatggctgcgcgaccagcatctg
gccgagcgtccgcgcctggccgaagggttgaaggtcgatgccggttgggagttggcggtg
gaaaccgtactgggtgccgaccttcaagcggtgctggtcgatgatttcgccggcttcgac
ctttccgggttcagccaaggcgatctgcgcctgctcagcccggccggcgacggcgtgcgg
gtgccgggcagcctgttggacaaagtcgaggcccaagtcgatctgtcgccctggctgggg
caggtcaagccagtggacagcctggaacaggccttggccttgcgtgggcaattggcggcc
ggcgaaagcctgatcagtcgtgacgggtattgggtcggccggcatttcctgcgtgtgcgc
cgggccagcgaagcggagagtggcatgctcgcccgcggccaggaaatccagcgcctgggc
gccgagcgcgaagagcgcgaggccagcgtcgaagcgctggaaaccgaattgcagaacctg
cgggcgcaacagcgtcaacaggaaaacggtcgcgaacatttgcgtcggctgttacaggac
gaagcgcgccagcagggcgaactcaaggcgcagctgtccgccggcaaggccaaggttgaa
caattggccctgcgccgcacccgtctggacgaagaaatcgccgagttgggcgagcagcgg
gcgctggaacacgagcagatcggcgaggcgcgcctgcaattgcaggaagcccttgatgcg
atggcgctggataccgagcagcgtgaattactgctggcccagcgcgacagcctgcgcgaa
cgcctcgaccgcgtgcgccaggaagcgcgccagcacaaggatcatgctcatcaactggcg
gtacgcctgggctcgctcaaggcgcaatacgattccacccgccaggccttggagcgcctg
gaaatgcagtccgagcgcctgactgaaaagcgcgaacagttgagcctcaacctggaggag
ggcgaggcgccgctggaagagctgcgcctcaagcttgaagaattgctcgacaaacgcatg
agcgtcgacgaagaactcaagaccgcgcagatcgccctggaagatgccgaccgcgagctg
cgcgacgccgagaagcgccgcagccaggccgagcagcaatcgcaactgatccgtggccag
atggaacagcagcgcatggagtggcaagccctgaccgtgcgccgcaaggccttgcaggac
cagctgctggaggacggctacgacctcaacggcgtactcgcgaccctggtggcgggggcg
aacgagaaggacgccgaggaagagctggaacgcattgcccagcgcatccagcgcctgggc
gcgatcaacctggccgctatcgacgaataccagcagcagtccgagcgcaagcgctacctg
gatgcccagaacgacgatctggtggaggcgctggagaccctggaaaacgtcatccgcaag
atcgacaaggaaacccgcaaccgcttcaaggatacctttgatcagatcaatggcggtttg
caggcacttttcccaaaagttttcggtggcggcagcgcctatttggaactgacgggcgaa
gatctactcgatactggggtgacaatcatggcgcgtcctcccggcaagaagaacagcacc
attcatttgctctccggcggtgaaaaagcgctgacggcactggccctggtctttgccatt
ttcaaactgaacccggcgccgttctgcatgctcgacgaagtcgacgcgccattggacgac
gccaacgtaggccgttacgcacggctggtgaaggagatgtctgaaacagtgcagttcatc
tacatcacccacaacaagatcgccatggagatggctgatcaactgatgggggtgaccatg
catgagccaggttgttcgcgactggtggcggtggatgtggaggaggccatggccatggtg
gacgcctga
DBGET
integrated database retrieval system
