Pseudomonas alvandae B21-020: LOY40_09110
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Entry
LOY40_09110 CDS
T08625
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas03030
DNA replication
pcas03430
Mismatch repair
pcas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOY40_09110 (dnaX)
03430 Mismatch repair
LOY40_09110 (dnaX)
03440 Homologous recombination
LOY40_09110 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcas03032
]
LOY40_09110 (dnaX)
03400 DNA repair and recombination proteins [BR:
pcas03400
]
LOY40_09110 (dnaX)
Enzymes [BR:
pcas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOY40_09110 (dnaX)
DNA replication proteins [BR:
pcas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LOY40_09110 (dnaX)
DNA repair and recombination proteins [BR:
pcas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LOY40_09110 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
ResIII
AAA_14
AAA_18
TIP49
AAA_30
AAA_2
AAA_19
TsaE
PIF1
nSTAND3
AAA_7
HasA
Rad17
SKI
Mg_chelatase
zf-CXXC
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
UVM74291
LinkDB
All DBs
Position
2007499..2009586
Genome browser
AA seq
695 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSSPCGECSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP
ERVVEHLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMAADVRAM
LGTLDHGQVYDVLHALIEGDAKALLEAVRHLAEQGPDWNGVLSEILNVLHRVAIAQALPD
GVDNGHGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADTSDAPRQALKPVGISQATADSAKPVAAAPVVAPAAASAPAAVAPVAQPIPAPAPAPVV
VTPEPEPEPVVEAVPEAVAEEVIDLPWNDPVEPEVVQQPAVEPVLETVAEQPELPPMPMP
TPDSAVPDAPEWVAAPMPEPTVADVDVATPGIDLDDEPPLDEDYIEPDMDSAYSYLDDLA
SEHAAEPAPEPEPEPAAMPATGLALQWLELFPKLQISGMTGSIAANCTLISVEGDHWLLH
LDPAHSALFNATQQRRLNDALNQYHQRTLTLTIELIKPEQETPAQAASRRRADRQREAED
SIHNDPFIQQMMQQFGAVVRHDTIEPVEAPVPQGS
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctcaaggctctgatcaatgccttggacagccagcggctgcaccacgcc
tatctgttcacgggcacccgtggcgtgggcaagaccaccatcgcgcggatcatcgccaag
tgcctgaactgtgaaaccggcatcacctcgtccccctgcggcgaatgttcggtttgccgg
gaaatcgacgaaggccgttttgtcgacctgatcgaaatcgacgccgccagccgcaccaag
gtcgaggacacccgcgaactgctcgacaacgtgcagtacgcgccgagccgtgggcgcttc
aaggtctacctgatcgacgaagtgcacatgctctccagccattccttcaatgcgctgctc
aagaccctcgaagaaccgccgccctacgtcaagttcatcctggcgaccaccgatccgcag
aaactccctgcaacgattctgtcgcggtgcttgcagttctccctcaagaacatgacgccg
gaacgcgtcgtcgagcatttgacccacgtgctgggcgtcgagaacgtgccgttcgaagac
gacgcgctgtggctgttaggccgcgccgccgatggttcgatgcgcgacgccatgagcctg
accgaccaggccatcgcgttcggcgaaggcaaggtcatggccgccgatgtgcgggccatg
cttggcacgcttgatcacggccaggtctatgacgtcttgcacgcattgatcgaaggcgac
gccaaggcgctgctggaagcggtgcgtcacctggccgagcagggcccggactggaatggc
gtgctctcggaaattctcaacgtgctgcaccgtgtcgccatcgcccaggccctgcctgat
ggcgtcgacaacggtcatggcgaccgtgatcgcgtactggccctggcccaggcgctgccg
gccgaggacgtgcagttctattaccagatgggcctgatcggccgtcgcgatctgcccctg
gcgccggacccgcgaggcggtttcgaaatggtcttgctgcggatgcttgcgttccggccc
gccgatacgtcggatgcgccgagacaagcgctaaagccagtggggatcagccaggccaca
gctgattccgccaagccagtggctgccgcgcccgtggttgcgccggcagcggcttctgct
ccggcggcggtggcgcctgtagcccagccgattccggcgccggcaccggcacctgttgtc
gtcacgcctgagccggagcccgaaccggtcgtcgaggcggttcccgaggccgtcgccgaa
gaagtcatcgacctgccatggaacgacccggtcgagccggaagttgtccagcaaccggcc
gtcgagcccgtgctggaaaccgtggccgagcagcctgaattgccaccaatgcccatgccc
acgccggacagcgcagtgcctgacgcgccggagtgggtggctgcaccgatgccggagcca
acggtggccgacgtcgatgtcgccacgccgggcatcgacctggacgacgagccgccgctg
gacgaggattacatcgaaccggacatggattcggcctacagctacctggacgacctggcc
agcgaacatgccgccgagccggccccggagcccgagccggaaccggcggcgatgccggcc
accggattggccctgcaatggctggagctgttcccgaagctgcagatcagcggcatgacc
ggcagcatcgccgccaactgcacgctgatctcggtggagggtgaccattggttgctgcac
ctggacccggcccacagcgcgctgttcaacgcgacccagcagcgtcgcctcaacgatgcg
ctgaaccagtaccatcagcgcaccctgacgttgaccatcgagctgatcaagcccgagcag
gagacgccggcccaggccgcgtcccggcgccgtgccgaccggcagcgtgaagccgaggat
tcgatccacaacgatccgttcatccagcagatgatgcaacagttcggcgccgtggtccgt
cacgatactatcgaacctgtcgaggccccggtcccccagggctcataa
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