Pseudomonas alvandae B21-020: LOY40_09285
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Entry
LOY40_09285 CDS
T08625
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcas01011
]
LOY40_09285
Enzymes [BR:
pcas01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LOY40_09285
Peptidoglycan biosynthesis and degradation proteins [BR:
pcas01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LOY40_09285
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Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
Motif
Other DBs
NCBI-ProteinID:
UVM74325
LinkDB
All DBs
Position
complement(2048356..2050284)
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AA seq
642 aa
AA seq
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MRSRLFSVLSCLFVCATAVQSAQAVDISTQRQYYDEAKRALAKGDSGPYFRYSQALRDYP
LEPYLAYDELTARLKSASNPEIEKFLAEHGDLPQANWMKLRWLRWLAERGDWATFVKYYD
PKLNFTELDCLNAQYQLEHGQKAEGYAATEKLWLSGKSQPATCDALFGVWAAQGQLTEQK
RWERTKLAAQARNYPLANSLVSGLTTLAPRGKLLVDVAQKPELLNQPSRFTPADEPMSDI
VSLGLRRLARQDPEKAMTLLDGYASTMRFSRDEKVAIAREIGLTLAKRFDSRALDVMTKY
DPELRDDTVSEWRLRLLLRLARWDDAYQLTRRLPESLASTNRWRYWQARSLELAQPQNPE
ALTLYKHLARERDFYGFLAADRSQSPYSLTNKPLVMSQALINKVRNTPGVRRALEFHARG
DIVDGRREWYHVSRHFNRDEMVAQAKLAYDLKWYFPAIRTISQAKYWDDLDIRFPMAHRD
TLVREAKIRGLHPSWAFAITRQESAFMDDARSGVGASGLMQLMPGTAKETARKFNIPLAS
PQQVLNPDKNIQLGAAYLSQVHSQFNGNRVLASAAYNAGPGRVRQWLRGADHLSFDVWVE
SIPFDETRQYVQNVLSYSVIYGQKLNSPQPLVDWHERYFDDQ
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtcgccttttcagtgtcttatcttgtttatttgtgtgtgccactgccgttcaa
tccgcccaggcggtggatatctctacccagcgccagtactacgatgaggccaagcgtgcc
ttggccaaaggtgattcaggcccctattttcgctacagccaggccctgcgcgattatccg
ctggagccgtacctggcctatgacgaactgaccgctcgcctcaagagcgcgagcaatccc
gaaatcgagaaattcctcgccgagcacggcgacctgccccaggccaactggatgaagctg
cgctggttgcgctggctggcggaacggggcgactgggcgaccttcgtcaaatactacgac
cccaagctcaacttcaccgaactggactgcctcaacgcccaataccagctcgaacacggg
cagaaggccgaaggctacgccgccacggaaaaactctggctcagcggcaaatcccagcca
gccacctgcgatgcgctgtttggcgtgtgggctgcacaaggccaactgaccgagcagaaa
cgctgggagcgaaccaagctggccgcccaggcgcgcaattaccccttggccaacagtctg
gtcagcggcctgaccaccctggctccccggggcaaactactggtcgacgtcgcgcagaag
cccgagttgctcaaccagccttcacgcttcacgcccgccgatgagccgatgtccgacatc
gtcagccttggcctgcgtcgcctggcacgccaggacccggaaaaagccatgacgctgctg
gacggctacgccagcaccatgcgtttctcccgggatgagaaagtcgccattgctcgggaa
atcggcctgaccctggccaagcgcttcgacagtcgcgccttggacgtcatgacaaaatac
gacccggaactgcgagacgacaccgtgtcggaatggcgcttgcgcctgttgctgcgcctg
gcccgctgggacgatgcctatcaactgacccgtcgcctgcccgagtcgctggcctccacc
aatcgctggcgctactggcaggcccgcagcctggaactggcgcagccgcagaatcccgaa
gcgctgacactctataaacacctggcccgcgaacgggacttctatgggttcctggccgcc
gaccgctcccaatcaccctactcgctgaccaacaagccactggtcatgagccaggcgctg
atcaacaaggtgcgcaatacgcccggcgtccgccgagcgctggagtttcacgcccggggc
gacatcgtcgatgggcgtcgcgagtggtatcacgtcagccggcatttcaaccgggacgaa
atggtcgcccaggcaaaactggcctacgatttgaaatggtatttcccggccatccgcacc
atcagccaagccaagtactgggatgacctggacatccgcttcccgatggcgcaccgcgac
acgctggtgcgcgaagccaagatccgcggcttgcatccgagctgggcgttcgccatcacc
cgacaggaaagcgccttcatggacgacgcccgctccggtgtcggtgccagcggtctcatg
cagttgatgcctggcaccgccaaggagaccgcccgcaagttcaacatcccactggcatcg
ccccagcaagtcctgaacccggacaagaacatccagcttggcgcggcctacctgagccag
gtccacagccaattcaacggcaaccgcgtcctcgcctccgccgcgtacaacgccgggcct
ggccgcgttcgccagtggctgcgcggcgcggaccacctgagcttcgacgtctgggtcgaa
agcattcccttcgacgaaacccgccagtacgtgcagaacgtactgtcctattcggtgatc
tacggccagaaactcaactcgccgcagccgctggtggactggcatgagcggtattttgat
gatcagtga
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