Pseudomonas alvandae B21-020: LOY40_09935
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Entry
LOY40_09935 CDS
T08625
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcas03032
]
LOY40_09935
03036 Chromosome and associated proteins [BR:
pcas03036
]
LOY40_09935
03400 DNA repair and recombination proteins [BR:
pcas03400
]
LOY40_09935
DNA replication proteins [BR:
pcas03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LOY40_09935
Chromosome and associated proteins [BR:
pcas03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LOY40_09935
DNA repair and recombination proteins [BR:
pcas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LOY40_09935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Barstar
Motif
Other DBs
NCBI-ProteinID:
UVM74447
LinkDB
All DBs
Position
2179945..2180217
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDAIAASADIPKAAAGRALDAVIESVTGALKAGDSVVLVGFGTFSVTDRPARVG
RNPQTGKTLQIAAAKKPGFKAGKALKEAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcggaactgattgatgctatcgctgcatccgctgatatcccgaaagctgct
gctggccgtgcgctggacgctgtaatcgaatccgtcactggcgctctcaaggctggcgac
tctgttgttctggttggtttcggtacgttctccgttaccgatcgtccagctcgtgttggt
cgcaacccgcagaccggcaagacgctgcagatcgctgctgccaaaaagccaggcttcaaa
gctggtaaagcgctgaaagaagccgttaactaa
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integrated database retrieval system
