Pseudomonas alvandae B21-020: LOY40_11715
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Entry
LOY40_11715 CDS
T08625
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LOY40_11715 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcas02044
]
LOY40_11715 (tssK)
Secretion system [BR:
pcas02044
]
Type VI secretion system
Imp/Vas secretion system core components
LOY40_11715 (tssK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
DUF7019
Motif
Other DBs
NCBI-ProteinID:
UVM74781
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Position
2581733..2583064
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AA seq
443 aa
AA seq
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MSLLPDAVCWHEGMQLLPQHFQLQGLRAEALAAHFAGACNPWFWGVSQLEVDPSALSAGQ
VRLLQLQGTLPDGLPVNLQAGIGPMLELDVSEAIDKTDDATVTVYLAVSPLWRAGQLLPL
KGRLQSVVGEALPDLTSGEFPESITVWRPNPRLCTQLSKADSICLPLLRIRKEGGGFWRV
PYTPPTPILLPESALGRRVAGVCARAREKCMFLAGRLRQAQAAGNQDDAMEIRRQLTALW
ARLPEVEGMLNTRVATPQALYGLLLGLAGSWSALDPLAGVPAFAPLDFVELQRGYEPLLD
WLETTLELVRAGYRSLAFERNEQVFSIQLPDDQPNQRLVIGLRMPNGAGEQAAAEWLRGA
IIASAPHIALLSRQRMSGLPHQAMSRNEQVAYSVGDDTRLFVVAASGQWFDGQLPLHIVA
PASAQASSPWQVVLFVAQASESA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgttacctgacgcggtgtgctggcacgagggcatgcaactgttgccccagcat
tttcagttgcaagggctgcgcgccgaggcactcgccgcgcattttgccggggcttgtaac
ccttggttctggggcgtcagccagttggaagtcgatccttcggccctgagtgccggccag
gtacgcctgctgcaattgcaaggcaccttgccggacggcttgccggtcaatctgcaagcc
ggtatcgggccaatgctggaactggacgtcagcgaggcgatcgacaagaccgatgacgcc
acggtgaccgtgtacctcgcggtgagcccgctatggcgcgccgggcaattactaccgctc
aaggggcgcttgcaatcggtggtcggcgaggctttgccagacctcaccagcggcgaattc
cccgaatcgatcacggtttggcgccccaacccgaggctgtgcacgcaactgagcaaggct
gattcgatctgcctgccattactgcgtatccgcaaggagggcggcggtttctggcgcgtg
ccgtatacgccgccaacgccgatcctgctgccggagtcggcccttggtcggcgggtggcc
ggggtgtgcgcgagggccagggaaaagtgcatgttcctcgccggtcgcttgcgtcaggcc
caggcggctggcaaccaggacgatgccatggagatccgtcggcagttgacggccctgtgg
gcgcgcttgccggaggtcgaaggcatgttgaatacccgggtggcgacgccccaggcgctc
tacggtttgttgctggggctggcggggagctggtcggcgctggatccgctggcgggcgtc
ccggctttcgcgccgttggattttgtcgagttgcagcgcggctacgagccgctgctcgac
tggctggaaaccaccctggaactggtccgcgccggttaccgaagcctggcgttcgagcgc
aacgagcaggtcttctcgatccagttgcctgacgaccagccgaatcaacgcctggtgatc
ggtttgcgcatgcccaacggcgccggcgaacaagcggcggccgaatggttgcgcggcgcg
atcatcgcgtcggcgccccacattgcgctgctgagccgccaacgcatgagcggtttgccg
caccaggccatgagccgcaacgagcaggtggcctacagcgtcggtgacgacacccgtttg
tttgtggtggccgcgagcgggcaatggttcgacggccaactgccgctgcacatcgtggcg
ccggcttcggcccaggccagcagtccgtggcaagtggtgttgttcgtggcgcaagccagt
gaaagtgcctga
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