Pseudomonas alvandae B21-020: LOY40_11875
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Entry
LOY40_11875 CDS
T08625
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas03030
DNA replication
pcas03430
Mismatch repair
pcas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOY40_11875 (dnaQ)
03430 Mismatch repair
LOY40_11875 (dnaQ)
03440 Homologous recombination
LOY40_11875 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcas03032
]
LOY40_11875 (dnaQ)
03400 DNA repair and recombination proteins [BR:
pcas03400
]
LOY40_11875 (dnaQ)
Enzymes [BR:
pcas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOY40_11875 (dnaQ)
DNA replication proteins [BR:
pcas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LOY40_11875 (dnaQ)
DNA repair and recombination proteins [BR:
pcas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LOY40_11875 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UVM74810
LinkDB
All DBs
Position
2618866..2619627
Genome browser
AA seq
253 aa
AA seq
DB search
MANRSVVLDTETTGMPVTDGHRIIEIGCVELIGRRLTGRHFHVYLQPDRESDEGAIGVHG
ITNEFLVGKPRFAEVADEFFEFIQGAQLIIHNAAFDVGFINNEFALMGQHDRADITRHCT
ILDTLMMARERHPGQRNSLDALCKRYGVDNSGRELHGALLDSEILADVYLTMTGGQTSLS
LAGNASDGNGTGEGSGNQATEIRRLPADRKPARIIRASENDLAEHAARLEAIAKSAGAPA
LWTQLVEAQATAN
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggccaacagatctgtagtactggataccgaaaccaccggcatgccggtgaccgacggt
caccggattatcgaaatcggctgtgtcgagttgatcggtcggcgcctgaccggtcgccat
ttccacgtttacctccaaccggaccgcgaaagcgatgagggcgccatcggcgtccacggc
atcaccaacgaattcctggtgggcaagccgcgtttcgccgaagtggccgatgagttcttc
gagttcatccagggcgcgcagctgatcatccacaacgcggcgttcgacgtcgggttcatc
aataacgaattcgccctgatgggccagcatgaccgggccgatatcacccggcattgcacc
atcctcgacacgctgatgatggcccgggaacggcacccggggcagcgcaacagcctcgat
gccttgtgcaagcgctacggcgtcgacaactccggtcgtgaattgcacggcgccttgctc
gactccgagatcctcgccgacgtctacctgaccatgaccggcggccagaccagcctgtcc
ctggcgggcaacgcctcggacggcaacggtaccggtgaagggtccggcaaccaggccacg
gaaatccgtcgcctgccggcggaccgcaagcccgcccggatcatccgcgccagcgaaaac
gacctggccgaacatgccgcacgtctggaagccatcgccaaatcggccggcgccccggca
ttgtggacgcagctggtcgaggcgcaggctacggcgaattga
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