Pseudomonas canavaninivorans: LOY40_12015
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Entry
LOY40_12015 CDS
T08625
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pcas
Pseudomonas canavaninivorans
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcas03400
]
LOY40_12015
DNA repair and recombination proteins [BR:
pcas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LOY40_12015
Archaeal homologous recombinant proteins
LOY40_12015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
MMR_HSR1
nSTAND3
NQRA
AAA_15
RsgA_GTPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UVM74837
LinkDB
All DBs
Position
complement(2651198..2654839)
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNTGRDAKVPDADGEIATGDPRTLLRRGTGDGYAEVDFRGIDGRRYRARWEANRAREKA
AGKLQASRQSLRDLDNDQLLASQKGEYKAQLEAALGLNFEQFTRAVLLAQSEFSAFLKAD
DNDRSELLEKLTDTALYTRLGRRAFDKAKQAKETHKQLQDQASGVTPLAPEARADLDERV
NQAQQALKTQQAQLKQLEQQQTWLKDLRQLQDEQASAAEQLQQAQADWDAQADERLKLVR
LEQLAPQRHQFIRQAELARQFEPLAIKIQQLTQQQVELHEQQGELEKGLGVAQLALVAAR
QQSTDNAPLLRQAFDEQSSLARLNQEAGQRAEQLQQAQLACTDGQRTLDSLLEQQRQVGE
RLQRIAAELEQSTGLAPLSDAWGAYRDRLQQLMLIGNRLNKGQDELALLEQNAARAAEDL
ATRRQDLEVLYKEADAEPQAVAEQIQLLGNLLQDNRKQLRAVEELARLWASQQELDKRSA
ELEQRQQRALQERDRLVREGGEAKAELTIAEQTLTVTRELLERQRLARSESVEQLREQLQ
DNQPCPVCGSVEHPYHQPEALLQSLGRFDESEQANARKAVELLNEKVIDLRAQYSGVIAQ
LKEFKQQQEQLATQHQGLAPSLEAHPLSAQMFAQDSPKRDAWLAQQTSQLQLRISQDEQR
QAALLTLQQDAARLTQQLRDAETANQQASQHLSNQQQELARDRQRLDEELEHFSPLLPAD
TLQALRSEPAATFMALDQRISQRLAQLEQQREELAEQLQRQQALEKEQDRQQLRVQQLES
AQQQFNALAEQQQACQEKLTQLLGEHSSAEQWQQQLDVALEQARQAEASANQQLQDLRNN
LVQLAAELKARQEQAQALEAEQQTLAAGIAQWRASHSELDDAALDALLSLDEQQVAQLRQ
RLLNSEKAIEQARVLLTERELRLHNHQAQDNGNLPAEQLADALATLHEQFTASEQQCADL
RAEQAEDQRRQNANQALAQQIEQAYTEYQRWARLDALIGSATGDRFRKLAQAYNLDLLVH
HANAQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSTVEVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcgccatccgcctcaagaaccttgcgtccctggccgggccatttgaaatc
gatttcaccgccgagccgctggccagcgccggcctgttcgccatcaccggccccacgggc
gcgggcaagagcacgctgctggatgccttgtgcctggcgttgtttggcgccgtgccacgg
ctgaacaacaccggtcgtgacgccaaggtgccggacgccgacggtgaaatcgccacgggc
gatccgcgcacgctgttacgccgtggcaccggcgacggttatgccgaagtggattttcgc
ggcatcgacggtcgccgctaccgggcccgctgggaggccaatcgcgcccgggaaaaagcc
gccggcaagttgcaggccagccgccagagcctgcgggatctggacaatgaccagctactg
gccagccagaaaggcgaatacaaggctcaacttgaagccgccctcggccttaatttcgag
cagttcacccgcgctgtgttgctggcacagagcgagttcagcgcgttcctcaaggccgac
gacaacgatcgcagcgaactgctggaaaaactcaccgacaccgccctgtatacccgcctc
ggacgccgcgccttcgacaaggccaagcaggccaaggaaacccacaagcagctgcaggac
caggccagcggcgtcacgcccctggcgcctgaggcccgcgccgacctggacgagcgcgtg
aaccaggcccagcaagcactcaagacccaacaggcgcagctcaagcaactggagcagcaa
caaacctggttgaaggacctgcgccagttacaggacgaacaggccagcgccgccgagcaa
ctgcaacaagcccaggctgattgggacgcgcaggccgatgaacgcctgaagctggtccgc
ctggaacaactggcgccgcagcggcatcagttcatccggcaggcggaactggcccggcag
ttcgagccactggcgatcaagatccagcagctgacccagcagcaagtcgagttgcatgaa
caacagggcgaattggaaaaaggcctgggcgtggcgcaactggcactggtcgcggcccgc
cagcagagcaccgacaacgcgcccctgctgcgccaggcgttcgatgaacaaagcagcctc
gctcgcctgaaccaggaagccggccagcgcgccgagcagttgcaacaggcccaactggct
tgcaccgacggccagcgtaccctcgactccctactggaacagcagcgacaggtgggcgaa
cgcctgcaacggatcgccgcagaactggaacaaagcaccgggctcgcaccactgagcgat
gcctggggtgcctatcgcgatcgccttcaacaattgatgctgatcggcaatcggctgaac
aagggccaggacgaactggcgctgctggagcaaaacgcggcgcgtgccgccgaggacctt
gcaacccgtcgccaagacctagaagtgctctacaaggaggccgacgccgaaccgcaggcg
gtggccgaacagatccagttgctcggcaacctcttgcaggacaaccgcaagcaactgcgc
gctgtcgaggaactggctcggttgtgggccagccagcaggaactggacaaacgcagcgcg
gaacttgagcaacgtcagcagcgcgccttgcaggagcgcgaccgactggtgcgcgaaggc
ggcgaagccaaggccgagctgacgatcgccgaacagaccctgaccgtgacccgcgaactg
ctggagcgccagcgcctggcccgcagcgaaagcgtcgagcaactgcgcgaacaactgcaa
gacaaccagccctgcccggtgtgcggcagcgtcgaacatccttaccatcagcccgaagca
ctgctgcagagcctcggtcgcttcgatgaaagcgaacaggccaacgcccgcaaagcggtg
gagctgctcaacgaaaaagtcatcgacctcagggcgcagtacagcggcgtcatcgcccag
ctcaaggaattcaagcaacaacaggaacaactcgccacccagcatcagggcctggcgcca
agccttgaagcccacccgctgtcggcgcagatgtttgcccaggattcgcccaagcgcgac
gcctggctggcccagcaaaccagccaactgcagctgcgcatcagccaggacgaacaacgc
caggccgccctgctcaccctgcaacaggacgccgcgcggctgacccagcaactgcgcgat
gcagagacagccaaccaacaagcgtcgcagcatctgagcaaccagcaacaggaattggcc
cgggatcgccagcgcctggacgaggagctcgagcacttcagcccgctgttgccggccgac
accttgcaggccctgcgcagcgaaccggccgccacgttcatggcacttgaccaacggatc
agccagcgcctcgcgcaattggaacagcaacgcgaagaactcgccgagcaacttcagcgc
cagcaagccttggagaaagagcaggatcgccagcagctccgcgtgcagcaattggaatcg
gcacagcagcagttcaatgccctggccgaacagcaacaggcctgccaggaaaaactcaca
caactgctgggcgaacactccagcgccgaacaatggcagcagcagctcgacgtggcgctg
gaacaggctcgtcaggccgaggccagcgccaatcaacagttgcaggacctgcgtaacaac
ctcgtgcaactggcggccgaactcaaggcccggcaggaacaggcccaggcgctggaggcc
gaacagcaaacgttggccgcgggcatcgcccaatggcgcgcctctcactcggaactggac
gacgcggcgctcgacgccctgctcagccttgacgagcaacaagtggcgcagttgcgacaa
cgcctgctcaacagcgaaaaagccatcgagcaggcccgcgtactgctcaccgaacgggag
ctgcgcctgcacaaccaccaggcgcaagacaacggcaacctgccggccgaacagttggct
gatgccctcgccacgctgcatgagcaatttaccgccagtgaacaacagtgtgcggacttg
cgcgccgagcaagccgaggaccagcgtcgacagaacgccaaccaggccctcgcccagcag
atcgagcaggcctacaccgagtaccagcgctgggcacgcctggatgcgctgatcggctca
gccaccggcgaccgcttccgcaaactggcccaggcgtacaacctcgatttgctggtgcac
cacgccaacgcccagttgcggcaattggttcgccgctaccgcctcaagcgcggcggcagc
atgctcgggctgctggtgatggacaccgaaatgggtgacgaactgcgctcggtgcattcg
ttgtccggcggcgaaaccttcctcgtctccctcgccctggcgctgggcctggcgtcgatg
gcgtccagcacgctgagaatcgagtcgctgttcattgacgaaggtttcggcagcctcgac
cccgagtcgctgcaactggcgatggacgccctcgatggcttgcaggcccagggccgcaag
gtcgcggttatctcccacgtgcaggaaatgcacgagcggatcccggtgcagattcaggtg
cgccgccagggcaacgggttgagcacggtggaggtgaaatga
DBGET
integrated database retrieval system
