Pseudomonas alvandae B21-020: LOY40_12020
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Entry
LOY40_12020 CDS
T08625
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcas03400
]
LOY40_12020
DNA repair and recombination proteins [BR:
pcas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LOY40_12020
Archaeal homologous recombinant proteins
LOY40_12020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
UVM74838
LinkDB
All DBs
Position
complement(2654836..2656080)
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AA seq
414 aa
AA seq
DB search
MRLFHTSDWHLGQNLHGQDRDFEHACFLDWLLRQLASEKPDVLLIAGDIFDTVNPPVKAQ
ERLYDFIVSAHEQNANLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDV
ERLLLPLPDAKGKVRAWCLALPFLRPAEVTGAQLGDDYLRGIGQVHEWLIAAANAKRKKG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFGPSITYVALGHLHKPQKVNRETR
IRYSGSPIPLSFSEIGYQHQILDITLDGEKLLNVEPRLIPRAVNLQRLGPAPLADVLVQL
KDLPDIDLLADVQRQPWLEVRVRLDEPQPDLRQQVETALQGKAVRLVRIAAEYAGSGTTT
GAEEGAALIELDQLSPQDLFSRAWQDTYGSEVDEQTLKDFAVLLQDVQMESEQP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgtttcacacctccgactggcacctggggcaaaacctccacggccaggatcgc
gacttcgagcacgcctgtttccttgactggctgctgcgtcagctggccagcgaaaaaccc
gacgtgctgctgattgccggcgatatcttcgacacggtcaacccgcccgtcaaagcccag
gagcgactgtacgacttcatcgtcagtgcccacgaacaaaacgccaacctgaccatcgtc
atgatcgccggcaatcatgattccggctctcggatcgaactgcccgcgccattgatgcgc
cgcttgcgcacccatgccctgggccgcgtcctgtggctggacgatggacaactggacgtc
gagcgcctgttgctgccgttgcccgacgccaagggcaaggtccgggcctggtgcctggcc
ctgccgttcctgcgaccggccgaggtcacgggcgcacaactgggggacgattacttgcgg
ggcatcggccaggtccatgaatggctgattgccgccgccaatgccaagcgcaagaaaggc
caggcactgatcgccatcagccatgcgcacatggcgggtggctcggtgtcggaggactcc
gagcgcagcctgatcatcggcaatgccgaagccctgcccgccagcctgttcggcccgagc
atcacgtatgtcgccctcggtcacttgcacaagccacagaaggtcaatagggaaacgcgc
attcgctacagcggctcgcccatcccgctgtcgttctcggaaatcggctatcagcaccag
atcctcgacatcaccctggacggcgagaaactgctgaacgtcgagccacggctgatcccc
cgcgccgtcaacctgcaacgcctgggcccggcgccgctggccgatgtcctggtgcaactc
aaggacctgcccgatattgacctgctggccgatgtccagcgccaaccctggctggaggtg
cgggtgcgcctcgacgagccgcaacccgacctgcgtcagcaagtggaaacggccctgcaa
ggcaaagccgtgcggctggtgcgaatcgccgccgagtacgccggcagcggcaccaccaca
ggcgccgaggaaggcgccgcattgatcgaactggatcagctcagcccgcaggatttgttc
agccgcgcctggcaggacacctacggcagcgaagtggacgaacagacgctgaaggatttc
gccgtgctcttgcaggatgtgcagatggagagcgaacagccatga
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