Pseudomonas alvandae B21-020: LOY40_12285
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Entry
LOY40_12285 CDS
T08625
Name
(GenBank) efflux RND transporter permease subunit
KO
K07789
multidrug efflux pump
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LOY40_12285
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcas02000
]
LOY40_12285
Transporters [BR:
pcas02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LOY40_12285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UVM74890
LinkDB
All DBs
Position
2719548..2722652
Genome browser
AA seq
1034 aa
AA seq
DB search
MNLSGPFIRRPVATMLLSFAIMLLGGVCFGLLPVSPLPQMDFPVIVVQANLPGASPEVMA
STVATPLERSFGAIAGVNTMSSRSSQGSTRVILQFDLDRDINGAAREVQAAINASRNLLP
SGMRSMPTYKKVNPSQAPVMVLSLTSDVLEKGQLYDLASTILSQSLSQVAGVGEVQIGGS
SLPAVRIELEPQLLNQYGVALDDVRTAIANSNVRRPKGSVEDDKRMWQVQANDQLEKAKD
YETLVIRYQDGSVLRLKDVAKVSDGVEDRYNSGFFNDDAAVLLVINRQAGANIIETVNEI
KNQLPALQAVLPASVKLNLAMDRSPVIKATLHEAEMTLLIAVALVVLVVFLFLGNFRASL
IPTLAVPVSLVGTFAVMYLYGFSLNNLSLMALILATGLVVDDAIVVLENISRHIDEGVPP
MKAAYLGAEEVGFTLLSMNASLVAVFLSILFMGGIIESLFREFSITLAAAIVVSLVVSLT
LTPMLCARWLKPHVPGQENRLQRWSHHVNERMVRGYARSLDWVLRHRRLTLLSLLVTVGV
NIALYVVVPKTFMPQQDTGQLIGFVRGDDGLSFNVMQPKMEIFRRAVLKDEAVQSVAGFI
GGNNGTNNAFMLVRLKPIKERAMSAQKVIERLRKEMPKVPGAQLMLMADQDLQFGGGREQ
TTSQYSYILQSADLASLREWYPKLVAAFRALPELTAFDARDGGGAQQVTLIVDRDQAKRL
GIDMDMVTAVLNNAYSQRQISTIYDSLNQYQVVMEVNPKYAQDPNTLEQVQVITADGARV
PLSAIAHYENSLEDDRVSHEGQFASESIAFDMAEGVTVEQGSAAIERAIAKLGMPEDVIA
KMAGTADAFAATQKSQPFMILGALLAVYLVLGVLYESYIHPLTILSTLPSAGVGALLSIY
VLGSEFSLISLLGLFLLIGVVKKNAILMIDLALQLERAGQTPLESIRSACLLRLRPILMT
TLAAILGALPLLLGGAEGSEMRQPLGLTIIGGLVFSQVLTLYTTPVVYLYLDNLRHRFNR
WRGVRTDAALETPL
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctccggccccttcatccgccgtcccgtggcgaccatgctgctgagcttcgcc
atcatgttgctcggcggcgtgtgctttggcttgctgccggtttcgccgctgccgcagatg
gatttcccggtgatcgtggtccaggccaacttgccgggagccagccccgaggtgatggct
tccaccgtggcaacgccgctggagcgctcgttcggcgccatcgccggggtcaataccatg
agcagccgttcgagccagggctccacccgcgtcatcctgcagttcgacctggatcgcgac
atcaacggtgcggcccgggaggttcaagcggccatcaacgcctcgcgcaacttgctgccc
agcggcatgcgcagcatgccgacctacaagaaggtcaacccgtcccaggcacccgtcatg
gtgctttcgctgacctccgatgtgctggagaagggccaactctatgacctggcctcgacg
atcctgtcccagagcctgtcccaggtggcgggtgtcggtgaggtgcagattggcggcagc
tccctgccggcggtgcgcatcgagctggagccgcaattgctcaaccagtacggcgtggcg
ctggatgacgtccgcacggcgatagccaatagcaatgtgcgccggcccaagggttcggtc
gaagacgacaagcgcatgtggcaagtccaggccaacgatcaactcgaaaaggccaaggac
tacgagacgctggtcatccgttaccaggatggctcggtgttgcggctcaaggacgtggca
aaggtcagcgacggcgtcgaggaccgctacaacagcggcttcttcaacgatgacgctgcc
gtgctgctggtcatcaaccgccaggccggcgccaacatcatcgagaccgtcaacgagatc
aagaaccagctgccggccctgcaagcggtgctgcccgccagcgtcaagctgaacctggcc
atggaccgctcgccggtgatcaaggccaccctgcacgaagcggaaatgaccctgttgatc
gccgtcgccctggtggtgctggtggtgttcctgttcctgggcaatttccgtgcgtcgctg
atcccgaccctggcggtgccggtgtcgttggtgggtacgttcgcggtcatgtacctgtac
ggtttttccctgaacaacctgtcactgatggcgttgatcctcgccaccgggctggtggtg
gacgacgccatcgtggtgctggaaaacatttcccggcacatcgacgaaggcgtgccgccg
atgaaagccgcctacctcggcgccgaggaggtgggcttcaccctgttgtcgatgaacgcc
tcgctggtggcggtgttcctgtcgatcctgttcatgggcgggatcatcgagagtctgttc
cgcgagttttccatcaccctggcggctgccatcgtggtttcgctggtggtgtccctgacg
ctcacgccgatgctctgcgcgcggtggctcaagcctcatgtgccgggccaggaaaaccgc
ttgcagcgctggagccatcacgtcaatgaacgcatggtcaggggttacgcccggagcctg
gactgggtgctgcgtcatcggcgcctgaccttgctcagcctgttggtgaccgtcggtgtg
aacattgccttgtacgtggtcgtgccgaagacgttcatgccgcagcaggacacgggccag
ttgatcggcttcgtgcgcggtgacgacgggctgtcgttcaacgtgatgcagccgaaaatg
gaaatcttccggcgcgcagtgctcaaggatgaagcggtgcagagcgtggcgggtttcatc
ggcggcaacaacggcaccaacaatgccttcatgctggtgcgcctcaagccgatcaaggag
cgggcgatgtctgcgcagaaggtcatcgagcgcctgcgcaaggaaatgcccaaggtgccc
ggtgcccaactgatgctgatggccgaccaggacctgcagttcggcggcggccgcgagcag
accacctcgcagtattcctacatcctgcagagcgccgacctggcgtccctgcgcgagtgg
taccccaagcttgtggctgccttcagggccttgccggagctgaccgccttcgacgcccgt
gacggcggcggggctcagcaagtgacgctgatcgtggaccgggaccaggccaagcgcctc
ggcatcgacatggacatggtcacggcggtgttgaacaacgcctacagccagcggcagatc
tcgacgatctacgacagcctcaaccaataccaggtggtgatggaggtcaatccgaagtac
gcccaggaccccaacacacttgaacaggtccaggtcatcaccgccgacggcgcgcgggtc
ccgctgtcggcgattgcccactatgaaaacagcctggaggacgaccgggtcagccatgag
gggcagttcgcgtccgagagcatcgccttcgacatggccgaaggcgtcacggtggagcag
ggctcggccgccatcgagcgcgcgatcgccaagcttggcatgcccgaggatgtcatcgcg
aaaatggccggtaccgccgatgcgttcgccgccacccagaaaagccagccgttcatgatc
ctcggggcgttgctggcggtgtacctggtgctgggtgtgctgtacgaaagctacatccac
ccactgaccatcctgtcgaccttgccctcggccggggtgggcgcgttgctgtcgatctac
gtgctgggcagcgagttcagcctgatctcgttgctggggctgttcctgttgatcggcgtg
gtgaagaaaaacgccatcctgatgatcgacctcgccctgcaattggaacgcgctggccag
acgccgctcgagtcaatccgcagcgcgtgcctgttgcggctgcggccgatcctgatgacc
acgctggcggcgatcctcggcgccttgccgctgttgctcggcggcgccgaaggctcggaa
atgcgccagccactgggcctgaccatcatcggcgggctggtgttcagccaggtcctgacg
ctttacaccacccccgtggtctacctctacctcgacaacctgcgccatcgtttcaaccgc
tggcgtggagtgcgcactgatgctgccctggaaactccgctatga
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