Pseudomonas alvandae B21-020: LOY40_13100
Help
Entry
LOY40_13100 CDS
T08625
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
KO
K11901
type VI secretion system protein ImpB
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LOY40_13100 (tssB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcas02044
]
LOY40_13100 (tssB)
Secretion system [BR:
pcas02044
]
Type VI secretion system
Imp/Vas secretion system core components
LOY40_13100 (tssB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
UVM75043
LinkDB
All DBs
Position
2893114..2893617
Genome browser
AA seq
167 aa
AA seq
DB search
MASYSFQNEVPKSRVNIKLDLHTGGAQKKVELPLKLMVMGDYSNGKEQRPLSERGKVNID
KHNVDNVLEEFSPRLAFAARNTLTGDGADMSVELSFQRMKDFEPEQVARQIPQLRALLAM
RNLLRDLKSNLLDNMTFRHELERILQDEALSDELRTELAALAPKEVR
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtacagttttcaaaatgaagtgcccaaaagcagggtcaatatcaaactcgat
ctacacaccgggggcgcacagaaaaaagttgaattgccgctgaagctgatggtgatgggg
gactacagtaacggcaaggagcagcgcccgttatcggagagggggaaggtcaatatcgat
aaacacaacgtcgacaacgtccttgaggaattctccccccgcctggcattcgctgcgcgc
aacacgctgacgggtgatggggcggatatgtcggttgaactgagttttcaacggatgaag
gattttgagccggagcaagtggcccgccagattccgcagttacgggcgctgttggccatg
cgcaacctgttacgcgaccttaagtcgaacctgctggacaacatgaccttccgtcacgaa
ttggagcgcatcctccaggatgaagccctcagtgatgaactccgaactgagctggcggca
ttggcgccaaaagaagtccgctaa
DBGET
integrated database retrieval system
