Pseudomonas alvandae B21-020: LOY40_13110
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Entry
LOY40_13110 CDS
T08625
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LOY40_13110 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcas02044
]
LOY40_13110 (tssK)
Secretion system [BR:
pcas02044
]
Type VI secretion system
Imp/Vas secretion system core components
LOY40_13110 (tssK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
UVM75045
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All DBs
Position
2895212..2896564
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AA seq
450 aa
AA seq
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MKIDRPLWTSGTLLSAQQFQQQARWEAWVNEQLASLALAHPWGVKAVEFDADALRLGKLK
ATRLSVRMPDGSLLDSERVDRLPPGLELSRLMSDDAGQALVLLALPLEQANGNNCLMQEG
RADRPTRYRQDWRPVQDLYADEVQSIAVLEHALTLRLDTDDNGDYLTCPIARLVREGQGR
WSLDPTYVPPLLSFAAHPGLLVQLDNLLTQLSAKRQRLMGMRRESNQRMADFAVADVSLF
WLLNALNTYQPILADLKAYPQRHPEQVYLELAKLAGSLLTFSLEHDIDKIPAYRHEHLET
VFPPLMRCIATLLEASLPSRVIALALEHSANRWQVTLNDARLREPDGADFYLSVRCQLPA
AQLQDQFPRLCKIGAPADVDELINAALDGVPLKPLNHVPAAIPLRLENQYFALDLGHPKG
QAMLTSGTFACYVPSTLSQVQLELFAVLRT
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgatcgtcccttgtggacgtccggcaccctattgtctgcgcaacagtttcag
caacaagcgcgctgggaagcgtgggtcaacgagcagctcgccagcctggccttggcgcac
ccttggggcgtgaaggctgttgagttcgacgccgatgcattgcgcctgggcaagctcaag
gctacccgcctgagcgtgcgcatgcccgacggcagcctgctcgacagtgaacgggtggat
cgcctgccgccggggctggagttgtcgcggttaatgagcgacgacgccgggcaggcgctc
gtgctgctggccttgcccttggaacaggccaacggcaacaactgcctgatgcaggagggc
cgggctgaccggccaacccgctatcgccaggactggcgaccggtccaggatctgtatgca
gacgaagtccagtcgatcgccgtgctggaacatgcgctgacgctgcgcctggatacggac
gacaacggcgactacctgacctgtcccatcgcgcgcctggtgcgtgaagggcagggcagg
tggagtcttgatccgacctatgtgccgccgctgctcagttttgccgcgcatccggggctc
ctggtccagctggacaatctgttgacgcagttgtccgccaagcgacagcgcctcatgggc
atgcgtcgggaaagcaaccagcgcatggccgatttcgccgtcgccgatgtgtcgttgttc
tggttgctcaatgccttgaacacctaccagccgatactggccgatctcaaggcatatccg
caacgccaccccgagcaggtctacctggaactggccaagctggccggcagcctgctgacg
ttttcgctggaacacgacatcgacaagattccagcctatcgccatgaacacctggaaacg
gtgttcccgccgctgatgcgctgtatcgctacgttgttggaagcgagcctgccgtcgcgc
gtcatcgccctggcgctggagcacagcgccaatcgctggcaagtgacgctcaacgatgct
cggcttcgtgagcccgacggggctgacttctacctgtcggtgcgctgccagttacctgcg
gcacagcttcaggatcagtttcctcgcctatgcaaaatcggcgcgccagcggatgtcgac
gaactgatcaacgcggcgctcgatggcgtcccgctgaaacccctcaaccatgtgccggcg
gccatcccgctgcgcctggaaaaccaatacttcgccctcgaccttggccatcccaagggg
caagccatgctgacttcggggactttcgcttgctacgtgcccagcaccttgtcgcaagtc
caacttgaactgtttgcggtgctacgcacatga
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