Pseudomonas alvandae B21-020: LOY40_14875
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Entry
LOY40_14875 CDS
T08625
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcas03000
]
LOY40_14875
Transcription factors [BR:
pcas03000
]
Prokaryotic type
Helix-turn-helix
Other families
LOY40_14875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
HTH_50
HTH_23
AAA_5
HTH_30
AAA_2
HVO_A0261_N
HTH_17
RWP-RK
HTH_28
PAS
NACHT
HTH_20
HTH_7
Motif
Other DBs
NCBI-ProteinID:
UVM69905
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Position
3308253..3310118
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AA seq
621 aa
AA seq
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MLSAHSRAHVDCVSRVLKNAARLPQLPVPDLILDSWRRSMEQHHLDPGSLQGPRILSHDV
LKQCRERSELFLNIASDEVARLHGRVRDADYCVLLTDAQGQTIDYRVETTLRNDCRKAGL
YLGTCWSEGEEGTCGVAAVLTAKTAVTVHKRDHFRAAFIGLTCSAAPVFDPQGELLGVLD
VSAVRSPDDRRSQHLIRQMVVQSAREIEQAFFMSSAQGYWVLRAHRNAGYVDSQPDFLLA
WDDDGCLQALNPAARQFLMQRYGQLPQHISQIFDAQLLHRARDESLYPLDVDLHGRLSAP
RRRATPRQRAAMAPTELDPRLADSLTLAVRVKDRNLPVLIQGETGSGKEVFARQLHQGSQ
RRDRPFVALNCAAIPESLIESELFGYVAGAFTGASAKGMQGLLQQADGGTLFLDEIGDMP
LALQTRLLRVLAEGEVAPLGASRRKAVDIQVVCATHRDLEALVATGEFREDLYFRLGGAR
FKLPPLRERTDRLALINRILEEESALCGGAVHLSGAALECLLGYHWPGNVRQLRHVLRYA
CAVCEASVIQLSHLPESLHSATAVDHGPEPSASPERQALLDALVRHRWKPTPAARALGIS
RATLYRRVHQHGIEMPGRSPG
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgctttccgctcactcccgggcgcatgtggattgcgtcagccgcgtgctgaagaacgcc
gcccgactgccgcaattgccggtgccggacctgatcctcgactcctggcgccgctccatg
gagcaacatcacctggaccccggctcgctgcagggcccgcggatcctgtcccacgacgtg
ctcaagcaatgccgcgagcgctcggaactgttcctcaatatcgccagcgacgaagtggcg
cgcctgcatggccgggtgcgcgatgccgactattgcgtgctgctgaccgatgcccagggc
cagaccatcgactaccgggtggaaaccacccttcgcaatgactgccgcaaggccgggctc
tacctggggacatgctggtcggaaggcgaagaaggcacttgtggcgtggcggcagtgctc
acggccaagacggcggtgacggtgcacaagcgcgatcacttccgcgcggcattcattggc
ctgacctgctccgccgcgccggtcttcgatccacaaggggaattgctcggggtgctggac
gtctcggcggtgcgttcgccggatgatcgccgctcccagcacctgatccggcaaatggtg
gtgcagagcgcccgggaaatcgaacaggcatttttcatgagcagcgcccagggttactgg
gtgctacgggcccatcgcaacgccgggtacgtcgacagccaaccggatttcctgctggcc
tgggacgacgatggctgcctgcaagcgctgaacccggcggcgcgccagttcttgatgcag
cgttacggccagttgcctcagcacatcagccagatcttcgacgcccaattgctgcaccgc
gcccgtgacgaaagcctctacccgcttgatgtcgatttgcatggccgcttgagcgcgcca
cggcgccgggccacgcctcgccagcgcgccgcgatggcgccgaccgagctcgatccacgc
ctcgccgacagcctgaccctggcggtgcgggtcaaggatcgcaacctgccggtgctgatc
cagggcgagaccggttccggcaaggaagtctttgcccgccagttgcaccagggcagccag
cgccgcgaccggcctttcgtggccttgaactgcgcggccataccggaaagcctgatcgag
agcgagttgttcggttatgtggccggtgcctttaccggcgcttcggccaagggtatgcag
ggcctgttgcagcaggccgatggcggcacgctgttcctcgacgaaatcggtgacatgccg
ctggccctgcaaacccgcctgttgcgggtgctggccgagggcgaagtggcgccgttgggg
gcatcgcggcgcaaggccgtggacatccaggtagtttgcgccactcaccgcgacttggag
gccttggtcgcgaccggcgaatttcgcgaggatttgtatttccgcctcggcggtgcccgt
ttcaaactgccacccctgcgcgaacgcaccgaccgattggcgttgatcaatcgcatcctg
gaggaagagtcggcgctgtgcggcggtgcggtgcacctgagcggcgcggcgctggaatgc
ctgctgggttatcactggccgggcaatgtccgccagttgcggcatgtgctgcgctatgcc
tgcgcggtctgcgaggccagcgtgatccagctcagccacctgcccgagtcactgcacagc
gcgactgccgtcgatcatgggccggagcccagcgccagtcctgaacgccaggcgttgctg
gacgccctggtgcgccatcgctggaaacccaccccggcggcgcgggccctgggcatttcc
cgggcaacgctgtatcgacgggtgcatcagcatggcatcgaaatgcccggccggagtccg
ggctga
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