Pseudomonas alvandae B21-020: LOY40_15125
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Entry
LOY40_15125 CDS
T08625
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcas01002
]
LOY40_15125
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcas01011
]
LOY40_15125
Peptidases and inhibitors [BR:
pcas01002
]
Cysteine peptidases
Family C82
LOY40_15125
Peptidoglycan biosynthesis and degradation proteins [BR:
pcas01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
LOY40_15125
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
UVM69951
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Position
complement(3365310..3366872)
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AA seq
520 aa
AA seq
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MFKKSACYLSLLLLVAPLVATAEDGDPAQAQTTLAQLSVNCPELAGGVDFPTVMSLQALY
QQNAGQAIWTDDGRLQALQVQLQQLADDGLDPARYNLPDEGRYINVACTDIAISQRYLQA
LHDLRFGHLPQNRLEPIWKANPQLPDRQAMVLHFAVAGLQDPAQAFELARPSLALYRDLR
ELYARQRQQPLADWQSVPSGPLLQPDKHDARVPVLARRLFNEGYLSVPPLDADEHYSPSL
VEAMKSFQLHHSLQADGVVGPWTVTELNISPAMRREQLRINLERMRWLAQDLEPDSVLVN
VAAAQLTVYQGGAPVWQTRTQVGRAERQTPLIKSRITRLTLNPTWTIPPTIMREDKLPEI
RRDPEFLARHNLKVLDRDGLPLAVENIDWEHPGDLMLRQDAGAKNPLGKLVVRFPNPFSV
YLHDTPSQALFSKGPRAFSSGCVRIEQVMHLRDLLVTPAERTRTDTLLASELTHEFRLAK
PLPILLGYWTVQADSQGQAVYIPDIYQRDVALSTAGQRAL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaaaagtccgcatgttacctgagccttttattgctcgttgcgccattggtcgct
acggccgaggacggcgatccggcccaggcgcaaaccacactggcgcaactgtcggtcaat
tgccccgaattggccggtggcgtcgactttccgacggtgatgagcctgcaggcgctttac
cagcaaaacgcaggccaggcgatctggacggacgacgggcggttgcaggcgttgcaggtc
cagctacagcaactggccgatgacggactcgatccggcccgttacaacctgccggacgag
ggccgttacatcaacgtggcctgtaccgacatcgccatcagccaacgctacctgcaagcc
ctgcatgacttgcgtttcggccatctgccacagaatcgcctggagccgatctggaaagcc
aatccccagttgccggaccggcaggccatggtgttgcatttcgccgtggcgggcctgcaa
gacccggcgcaggctttcgagttggcgcggccgagcctggcgctttatcgcgacttgcgc
gaactttacgcaagacaacgacagcagcccctggcggactggcaatcggtgcccagcggc
cccttgttgcaaccggacaagcacgacgctcgcgtacccgtgctggcccggcgcctgttc
aacgaaggctacctcagcgtgccgccactcgatgccgacgagcattacagcccgagcctc
gtggaggcgatgaaaagcttccagcttcatcattcgctgcaagccgatggggtcgtcggg
ccctggaccgtcaccgaactgaatatcagcccggccatgcgccgcgagcagttgcgcatc
aacctggagcgcatgcgttggctggcccaggacctggagcccgacagcgtgctggtcaac
gtggcggcggcgcaactgacggtctaccagggcggcgcgcccgtgtggcaaacccggacc
caggtagggcgtgccgaacgccagacacccttgatcaaatcgcgcatcacccgcctgacg
ctcaaccccacgtggaccatcccgccgacgatcatgcgtgaagacaaactgcccgagatt
cgccgcgacccggagtttcttgcccggcataacctcaaggtgctcgatcgggatggcttg
ccgctggcggtggaaaatatcgattgggaacatcctggcgacctgatgctgcgccaggat
gccggtgcgaaaaaccccttgggcaaattggtggtccgctttcccaatccgttttcggtg
tacctgcatgacactcccagccaggcgctgttcagcaagggcccgcgggcgttcagttcg
ggctgcgtgcgtatcgagcaagtcatgcacctgcgggacctgttggtgactcctgccgag
cgcacccggaccgatacgttgctggccagcgagctgactcatgaattcaggctggccaag
cccctgccgatcctgctgggttattggacggtgcaggcggacagccagggtcaggccgtg
tacatcccggatatctatcaacgggatgtcgcgttgtccacggctggccagcgtgcactc
tga
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