Pseudomonas alvandae B21-020: LOY40_15940
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Entry
LOY40_15940 CDS
T08625
Symbol
kdgR
Name
(GenBank) DNA-binding transcriptional regulator KdgR
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcas03000
]
LOY40_15940 (kdgR)
Transcription factors [BR:
pcas03000
]
Prokaryotic type
Helix-turn-helix
IclR family
LOY40_15940 (kdgR)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
TrmB
HTH_5
HTH_11
HTH_24
DUF5817_CT
HTH_6
FUR
HTH_22
HTH_20
MarR
HTH_23
HTH_29
Fe_dep_repress
PadR
HTH_36
MCM_C
FeoC
Rrf2
HTH_27
HTH_69
HTH_Cmi2_C
WHD_MCM8
HTH_Crp_2
DUF7343
HTH_7
NirdL-like_HTH
TetR_N
HTH_34
HTH_17
HTH_45
Dimerisation
HTH_32
RPA_C
Motif
Other DBs
NCBI-ProteinID:
UVM70108
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Position
3578803..3579585
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AA seq
260 aa
AA seq
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MDNSVIPNNDLVSAVGRTMAVLEALAEHPEESGVSEIATKLDMSKATVYRFLQSLKARGY
VVQDAEDRYRLSVRLFELGAQALPHLDIVREAEPGMRRINELTGETVHLGILDEGSIVYV
HKIDSKYNLRMYSRIGRRAPLYCTGIGKVLMAWLEEDELLAHLAQESFERRTANTLTSVE
AYLQELEIVRRQGYAEDHEEFEDNMRCLAAPIRDRFGHVIGGMSVSFPCFRFREELKQDY
VRQLMHATQQISSQLGWHAG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggacaacagcgtcattcccaataacgatctggtgtcggcggtgggccggaccatggcc
gtgctcgaggcactggccgagcatccggaagaaagcggcgtgtcggaaatcgccaccaaa
ctggacatgtcgaaggccacggtttatcgcttcttgcagtcgctcaaggcccgtgggtat
gtggtgcaggatgccgaggatcgctatcgcctcagcgtccgcctgttcgaattgggcgcc
caggccctgccccacctggacatcgtccgggaagcggagccgggcatgcggcggatcaac
gagctgaccggcgagaccgtccacctggggatcctcgacgagggcagcatcgtctacgtg
cacaagatcgactccaagtacaacctgcgcatgtactcgcgaatcggccggcgggcgccg
ttgtactgcaccgggatcggcaaggtgctgatggcctggctcgaagaagatgagttgctg
gcgcacctggcgcaggaaagcttcgagcgccgcaccgccaacaccttgaccagcgtcgag
gcgtatctgcaggaattggaaatcgtccgccggcaaggctatgccgaggaccacgaagag
ttcgaagacaacatgcgctgcctggcggcacccatccgcgaccgttttggccatgtgatc
ggcgggatgagcgtttcattcccgtgctttcgcttcagggaagagttgaagcaggactac
gtcaggcaactgatgcatgccacccagcagatctcaagccagttgggttggcatgcgggg
taa
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