Pseudomonas alvandae B21-020: LOY40_17100
Help
Entry
LOY40_17100 CDS
T08625
Symbol
hpaA
Name
(GenBank) 4-hydroxyphenylacetate catabolism regulatory protein HpaA
KO
K02508
AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcas03000
]
LOY40_17100 (hpaA)
Transcription factors [BR:
pcas03000
]
Prokaryotic type
Helix-turn-helix
AraC family
LOY40_17100 (hpaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
AraC_binding
HTH_AraC
Cupin_2
Cupin_6
AraC_binding_2
Motif
Other DBs
NCBI-ProteinID:
UVM70324
LinkDB
All DBs
Position
complement(3838219..3839121)
Genome browser
AA seq
300 aa
AA seq
DB search
MIDRQPIPNINIGQVYDQRYSDAEVHYDKLGNLAEFFGRNMPVHRHDRFFQVHYVKSGAV
RVYLDDQQYLESGPMFFLTPPTVAHSFVTEADADGHVLTVRQQLVWQLIDADPSLAPGSQ
LPAACVALTRLEPQFQPEVRRLEFLFEELCSEINATGAGRSSALDSLTRLIMISLLRLCA
NSLEARPARHEDLRIFHRFNELIEDHYLQHWPLSRYADGIGVTEARLNDVCRRIADLPSK
RLILERLMQEAKRLLLFTGSSANEICYQLGFKDPAYFSRFFQRYAQVTPGEYRQRQSGLR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatcgtcagccgatccccaatatcaacatcggtcaggtctatgaccaacgctac
agcgatgccgaggtgcattacgacaaacttggcaacctggcggaattcttcggccgcaac
atgccggtgcaccgacacgaccgattctttcaggtgcattacgtgaagagtggcgcggtg
cgggtctatctggacgaccagcaatacctcgagtcgggaccgatgtttttcctcacacca
ccgacggtggcccactcctttgtcaccgaagcagacgccgacgggcatgtattgacggta
cgacagcaactggtctggcagttgatcgatgccgacccgagcctggcgcccggctcgcag
ctgccggcagcttgcgtcgcgctgacgcggctggagccacaattccagcccgaggtgagg
cgactggagtttctgttcgaggaactgtgcagcgagatcaatgccactggggcgggacgg
agttcggcactggacagcctgacgcgcctgatcatgatcagtctgctcagactctgcgcc
aactccctggaagcccgcccggcgcgccacgaagatttgcgaattttccaccgcttcaac
gaattgatcgaagaccactacctgcaacactggccgctgtcgcgttacgccgatggcatt
ggtgttaccgaggcacggctcaacgacgtctgccggcgcattgccgacttgccgtcgaaa
cggctgatcctcgaacgactgatgcaggaagccaagcgcctgttgttgttcaccggcagt
tcggccaatgagatctgctaccagctgggcttcaaggacccggcttatttcagtcgattc
ttccagcgttatgcgcaggtgacccctggggagtatcgccagcggcagtcgggtttgcgc
taa
DBGET
integrated database retrieval system
