Pseudomonas alvandae B21-020: LOY40_18910
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Entry
LOY40_18910 CDS
T08625
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LOY40_18910 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcas02000
]
LOY40_18910 (choW)
Transporters [BR:
pcas02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
LOY40_18910 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
UVM70658
LinkDB
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Position
4232406..4233254
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AA seq
282 aa
AA seq
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MWTTQEKLPLGEHIARYVEWLTQHGADVFDAISSSLSEIISLFTSALLWFNPLALIGLLA
LLAFYIQRKVSLTLFVALSFLLILNLGYWQETIETLAQVTFATLVCVIVGVPLGIVAAHR
PWFYAALRPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGVRDV
PQELMDAGKAFGCSRRQLLARIELPHAMPSIAAGITQCIMLSLSMVVIAALVGADGLGKP
VVNALNTADIAMGFEAGLAIVLLAIILDRICKQRETVRRGDA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtggactacgcaagaaaaacttccattgggcgagcacatcgcccggtacgtcgagtgg
ctgacccagcatggcgctgatgtattcgacgccatatcgtcgtcgctctccgaaatcatc
agcctcttcaccagcgccctgctctggttcaatccgttggccttgatagggctgctggcg
ctgctcgccttctacattcaacgcaaggtgagcctgacgctgttcgtcgcgctgtcgttc
ctgttgatcctcaacctgggctactggcaggaaaccatagagaccctggcccaggtgaca
ttcgccacgctggtgtgcgtgatcgtcggcgtgccgctggggatcgtcgcggcgcatcgc
ccctggttctacgcagccttgcgaccggtgctcgacttgatgcagaccgtgcccaccttc
gtctacctgatcccgaccttgacgctgttcggcctcggcgtcgttccggggttgatctcc
acggtggtcttcgccatcgccgcgccgattcgccttacgtacctgggcgtgcgtgacgtc
ccgcaagaattgatggacgccggcaaggcgttcggttgctcgcgtcgccagttgttggcc
cgcatcgaactgccccatgcgatgccgagcatcgccgccggcatcacccaatgcatcatg
ttgtcgctgtcgatggtggtcatcgccgcgctggttggcgcggacggcttgggcaaacct
gtcgtcaatgcgttgaacacggctgatatcgccatgggcttcgaagcaggcctggcgatc
gtgctcctggcgatcatcctcgaccgcatttgcaaacagcgcgaaaccgtaagacgaggt
gacgcatga
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