Pseudomonas alvandae B21-020: LOY40_19670
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Entry
LOY40_19670 CDS
T08625
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LOY40_19670 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcas03400
]
LOY40_19670 (uvrB)
DNA repair and recombination proteins [BR:
pcas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LOY40_19670 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LOY40_19670 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
AAA_30
HAMP
Motif
Other DBs
NCBI-ProteinID:
UVM70794
LinkDB
All DBs
Position
complement(4376168..4378183)
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFQPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESISAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLDAIEGIKVELQERLEYLRSNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPAGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWESVSPQTIFVSATPGNYEAEHAGRVVEQVVRPTGLVDPQ
VEVRPALTQVDDLLSEITKRVALEERVLVTTLTKRMAEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRMTGSMERAIGETERRRDKQIAFNLANGITPKGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEESARYEAELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQLRDE
IGKLRERLLAV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattccagctcgtcactcgcttccagcccgccggcgaccagccagaagccatc
cgcctgatggtcgaaggcatcgaggccgggttggcgcaccagacattgctcggtgtaacc
ggctcgggcaagaccttcagcatcgccaacgtgatcgcccaggtgcagcgaccgactttg
gtgctggcgccgaacaagaccctggcggcgcagttgtacggcgagttcaaggcgtttttc
ccgaacaacgccgtggaatacttcgtttcctactacgactactaccagcccgaagcgtat
gtgccgtcgtcggacaccttcatcgagaaagacgcctcgatcaacgaccacatcgaacag
atgcggctgtcagcgaccaaggcactgctcgaacgcaaggacgcgatcatcgtcaccacg
gtgtcgtgcatctacggcttgggcagcccggaaacctacctgaaaatggtgctgcacgtg
gaccgcggcgacaaactcgaccagcgcgccttgctccggcgcctggcggacttgcagtac
acccgcaacgacatggatttcgcccgggcgacgttccgggtgcgcggcgatgtgatcgac
atctacccggcggaatcggacctggaagcgatccgcatcgagctgttcgacgatgaagtc
gagagcatctcggccttcgatccgctgaccggcgaagtgatccgcaagttgccacgcttc
accttctaccccaagagccactacgtgacgccccgggaaaccctgctggacgccatcgag
gggatcaaggtcgagttgcaggagcgcctggagtatctgcgttcgaacaacaagttggtg
gaagcccagcgtctggagcagcggacccggttcgacctggagatgatcctggaactgggc
tactgcaacggcatcgagaactactcgcgctacctgtcgggccgtccggcgggtgcgccg
ccgccgaccttgtatgactacctgccgcctgacgccttgctggtgatcgacgaatcccac
gtcagcgtgcctcaggtcggcgccatgtacaaaggcgaccgttcgcgcaaggaaaccctg
gtggaatacggtttccgcctgccttcggcactggacaaccggccgatgcgcttcgacgaa
tgggaaagcgtcagcccgcagacgatttttgtctcggccacccctggcaactacgaagcc
gagcatgccgggcgggtggtcgagcaggtggtacggccgaccggcctggtcgacccgcaa
gtcgaggtgcgtccggcgctgacccaggtcgacgacctgttgtcggaaatcaccaagcgc
gtggcgctggaggaacgggtgctggtcaccacgctgaccaagcgcatggccgaagacctc
accgactacctggccgaccatggcgtgcgggtgcgttacctgcactcggacatcgacacc
gtggaacgggtcgagatcatccgcgacctgcgcctgggcaccttcgacgtgctggtgggc
atcaacctgctgcgtgaaggcctggacatgccggaagtgtcgctggtggcgattctcgac
gcagacaaggaaggtttcctgcgttcagagcgctcgttgatccagaccatcggccgcgcg
gcgcgtaacctcaatggccgcgcgattctgtatgccgaccgcatgaccggttccatggag
cgggccatcggcgagaccgagcgccgccgcgacaagcagatcgccttcaacctggccaat
ggcatcacccccaagggcgtgttcaaggacgtcgccgacatcatggaaggcgccaccgtg
cccggctcgcgcagcaagaagcgcaagggcatggccaaggccgccgaagagagcgcccgc
tacgaggccgaactgcgctcgccgagtgagatcaccaagcgaatccggcagttggaagag
aagatgtatcaactggctcgggacctggagttcgaagccgcggcgcaattgcgcgatgag
attggcaagttgcgggagcggttgctggctgtctga
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integrated database retrieval system
