Pseudomonas alvandae B21-020: LOY40_19850
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Entry
LOY40_19850 CDS
T08625
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcas02000
]
LOY40_19850
Transporters [BR:
pcas02000
]
Other transporters
Pores ion channels [TC:
1
]
LOY40_19850
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OprF
OmpA
OMP_b-brl
DUF748
TSP_3
Motif
Other DBs
NCBI-ProteinID:
UVM70827
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All DBs
Position
complement(4446923..4447957)
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AA seq
344 aa
AA seq
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MKLKNTLGFAIGSLIAATSFGALAQGQGAVEIEGFAKKEMFDSARDFKNNGNLFGGSVGY
FLTDDVELRLAYDEVHNARTEDGTNVKGANTALDALYHFNNPGDMLRPYVSAGFSDQSID
QNGSNGRNRSTFANVGGGAKLYFTDNFYARAGVEAQYNIDQGDTEWAPSVGIGVNFGGGS
KPAAAPVPAPAEVCSDSDNDGVCDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDF
DKSVVKENSYGDIKNLADFMKQYPSTSTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTN
QYGVESSRVQSVGYGESRPVADNATEAGRAVNRRVEAQVEAQAK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaaaacaccttgggctttgccattggttctttgattgctgccacttcgttc
ggcgctctggcacaaggccaaggcgcagttgaaatcgaaggcttcgccaagaaagaaatg
ttcgacagcgctcgtgatttcaagaacaacggcaacctgttcggcggttcggttggttac
ttcctgaccgacgacgttgaactgcgtctggcctacgacgaagtgcacaacgcacgtacc
gaagacggcactaacgtcaagggcgcgaacaccgctctggacgctctgtaccacttcaac
aacccaggcgacatgctgcgtccttacgtctctgccggtttctctgaccagagcatcgac
cagaatggcagcaacggtcgtaaccgttctaccttcgccaacgttggtggcggcgccaag
ctgtatttcaccgacaacttctacgcccgtgccggcgttgaagctcagtacaacatcgac
cagggcgacaccgagtgggctcctagcgtcggtatcggtgtgaacttcggtggcggctcc
aagcctgctgctgctccagttccagctccggctgaagtctgctccgacagcgacaacgat
ggcgtgtgcgacaacgtcgacaagtgccctgacaccccagccaacgtaaccgttgacgct
gatggctgcccagctgttgctgaagtcgtacgtgttgagctggacgtcaagttcgacttc
gacaagtctgttgttaaagaaaacagctacggcgacatcaagaacctggctgatttcatg
aagcagtacccatccaccagcaccactgttgaaggtcacactgactccgtcggtcctgac
gcttacaaccagaaactgtctgagcgtcgtgcaaacgccgtcaagcaagttctgaccaac
cagtacggtgttgaatcgtcccgcgttcagtctgttggctacggcgaatcccgcccagta
gctgacaacgccactgaagctggtcgtgcagttaaccgtcgcgtagaagcgcaggttgaa
gcccaagctaagtaa
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