Pseudomonas alvandae B21-020: LOY40_20105
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Entry
LOY40_20105 CDS
T08625
Name
(GenBank) response regulator
KO
K20973
two-component system, sensor histidine kinase SagS [EC:
2.7.13.3
]
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas02020
Two-component system
pcas02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LOY40_20105
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LOY40_20105
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pcas01001
]
LOY40_20105
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pcas02022
]
LOY40_20105
Enzymes [BR:
pcas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
LOY40_20105
Protein kinases [BR:
pcas01001
]
Histidine kinases
Other
LOY40_20105
Two-component system [BR:
pcas02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
LOY40_20105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
HATPase_c_2
PDE8A_N
IFT57
HetE-N
Motif
Other DBs
NCBI-ProteinID:
UVM70875
LinkDB
All DBs
Position
4510292..4512613
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AA seq
773 aa
AA seq
DB search
MDIRFTQRLSYKQARLTVLVGFVLGTLLSLVQIGIDYASEDASINREILSLLEISHNPAS
RIAYNIDAELAQELALGLLRSPAIIGAELIDNNNTVLASVKRPELQSNYRFISDFLFGAQ
RQFEDRLYLNHLPDESLGILRLDVDTYSFGSRFLRRAEVTLLNGFARSLILTGLLLALFY
VMLTKPLVRVIRELSSRDPSSSEQSPLECPTGHQYDEIGVLVSVANQQFENISTEIQQRR
TAENRLTDYLAQLENIVSARTAELKAINARLSQSNDELEIARRTALDMAEARSAFLANMS
HEIRTPLNGLLGMIALSLDGPLTAEQQQQLSIAHDSGKVLVELLNDILDLSKFDAGQLEL
ERIPFDLGSLIEDTANLLSQNAAPSVELACLIEPQFPAQVLGDPTRVRQIVSNLLSNALK
FTRFGRVDVRLSQHEGGVRIEVCDTGIGIPQEAQARILQPFTQAGAGITRQFGGTGLGLA
LTYNLCEAMQGRLTISSEAGFGSQFCADLPLPCHTPAAPIEPLRGNVVAITTANSGLAEL
LGMLVPGWGLDYVQRSVDDGLLGLKPDILITDCPECLFNLRPTFAAPILLVTAYGSFMPS
EEAAALAPLLQQARPLARHALYQILRRALQSEATTINDAQIEALAPSRRGRVLLVEDNPV
NQLVAKGMLVKLGCEVVVAAHGIEALDQLEQQDFDLVLMDCNMPVMDGYEASRQIRRSGR
WLNLPIVALTANAMPEERERCRAAGMSDYLSKPFRREELAALLDQWVPTTSAL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaggttcacccaacggctgtcgtacaagcaggcccgactgaccgtcctggtg
ggtttcgtgctgggcacgttgttaagcctggtgcagatcggcatcgattatgccagcgaa
gacgcgtcgatcaaccgtgaaatcctgtccctgttggaaatcagccacaacccggcatcg
cgcatcgcctataacattgacgccgaactcgcccaggaactggccttgggcctgttgcgt
tcaccggccatcattggcgccgaactgatcgataacaacaatacggtgctggcgagcgtc
aagcgccctgaactgcaaagcaactaccgctttatcagcgactttcttttcggcgcccaa
cgccagttcgaagaccgactctatttgaaccatctgcctgacgagtccctgggtatcctg
cgactggatgtcgatacgtattccttcggcagtcgcttcctgcgccgggccgaggtcacc
ctgctcaacggtttcgcccgcagcctgatcctgaccggcctgctgctcgccttgttctac
gtcatgctgaccaagccactggtacgggtcatccgcgagctgagcagccgcgacccgagc
agcagcgagcaaagtcccctggaatgccctaccggccaccaatacgacgaaatcggcgtg
ctggtgtcggttgccaaccagcagtttgaaaacatctcgaccgaaatacagcaacggcgc
acggctgaaaatcgcctcaccgattacctggcgcaactggaaaacatcgtttcggcgcgc
accgccgagctcaaggccatcaatgcccgcctcagccagtccaacgatgaactggagatt
gcccggcgtaccgccctggacatggccgaagcccgctccgcgttcctggccaacatgagc
catgaaatccgaacgccactcaacggactgctcgggatgatcgcgttgtccctggacggt
ccattgaccgccgaacaacagcaacagctctcgattgcccatgactcgggcaaggtattg
gtggagctgctcaacgatatcctcgacctgtccaagttcgacgccggccaactggaactc
gaacgcataccgttcgacctcggctcgctgatcgaggacaccgccaacctgctgtcacaa
aatgccgcgccgagcgtcgaactggcgtgcctgatcgaaccgcagttccccgcccaggta
ttgggcgatccgacccgcgttcgccagatcgtcagcaacctgctgtccaacgccttgaag
ttcacccgcttcggccgggtcgacgtgcgcttgagccaacacgaaggcggcgtgcggatc
gaggtctgcgacacgggcatcggcataccccaggaagcccaggcacggatcctccagccg
ttcacccaggctggcgccggcatcacgcgccagttcggcggcaccgggctcgggctggca
ctgacctacaacctctgtgaagccatgcaaggccggttgacgatcagctccgaggcgggc
ttcggcagccaattctgcgcagacctgccactgccttgtcacacgcccgcagcccccatc
gagcccttgcgtggcaatgtcgtcgccattaccactgccaatagcggattggccgaattg
ttgggaatgctggtgcccggctggggattggactatgtacaacgttccgtggatgacggg
ctgctggggctcaagcccgacatcctgatcaccgattgcccggaatgcctgttcaatctg
cggccgactttcgcggcgccgatcctgctggtgaccgcctacggcagcttcatgcccagc
gaagaggcggccgccctcgcccccttgctgcaacaagcccggccgctggcgcgccatgcg
ctttatcagatattgcggcgcgccctgcaaagcgaggcgaccaccatcaacgacgcgcag
atcgaagcgctggcgccttcgcgccgtgggcgagtgctgttggtggaagacaaccccgtc
aaccaattggtggccaagggcatgctggtgaaactgggctgcgaggtcgtcgtcgcggcc
cacggcatcgaggcccttgaccagctcgaacagcaggatttcgatctggtgttgatggac
tgcaacatgccggtcatggacggttatgaagccagccggcagattcgtcgcagcgggcgc
tggctcaacctgccaattgtcgcgctgactgccaatgcgatgcccgaggaacgcgaacgc
tgccgcgccgccggcatgagcgattatctgtccaagccgttccgacgcgaagagctcgcg
gcattgttggatcagtgggtgcccactacgtcagcgctttga
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