Pseudomonas alvandae B21-020: LOY40_20500
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Entry
LOY40_20500 CDS
T08625
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LOY40_20500 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pcas03011
]
LOY40_20500 (rpsA)
Ribosome [BR:
pcas03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LOY40_20500 (rpsA)
Bacteria
LOY40_20500 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
UVM70951
LinkDB
All DBs
Position
complement(4588777..4590468)
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AA seq
563 aa
AA seq
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MSESFAELFEESLKTLNLQAGSIITGVIVDIDYQARWVTVHAGLKSEALIPLEQFYNDAG
ELNINVGDEVHVALDSVEDGFGETKLSREKAKRAECWIVLEAAFAAEEVVKGVINGKVKG
GFTVDVNGIRAFLPGSLVDVRPVRDTTHLEGKELEFKVIKLDQKRNNVVVSRRSVLEAEN
SAEREALLESLQEGQQVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRIKHPSEIVNVG
DEIDVKVLKYDRERNRVSLGLKQLGEDPWVAIKARYPEGTRVTARVTNLTDYGCFAELEE
GVEGLVHVSEMDWTNKNIHPSKVVQVGDEVEVMVLDIDEERRRISLGIKQCKSNPWEDFS
GQFNKGDKISGTIKSITDFGIFIGLDGGIDGLVHLSDISWNEVGEEAVRRFKKGDELDTV
ILSVDPERERISLGIKQLESDPFSEYVQENDKGAIVKGIVKEVDAKGAIITLADDIEATL
KASEISRDRVEDARNVLKEGEEVEAKIISVDRKSRVIQLSIKSKDDAEEKEAIQSLRDKP
ATDIAAGPTTLGDLLRAQMEKQN
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaagctttgcggaactctttgaagaaagcttgaaaaccctgaaccttcaggca
ggctccatcatcaccggcgttatcgttgatatcgattaccaagctcgctgggtaaccgtt
cacgctggtctgaagtctgaagcgctgatcccgcttgagcagttctacaacgacgctggc
gaactgaacatcaacgttggtgacgaagttcacgtggcgttggattcggttgaagatggc
ttcggtgaaaccaagctgtcccgtgagaaagccaagcgtgctgaatgctggatcgttctg
gaagcggccttcgcagctgaggaagtggtcaagggcgttatcaacggtaaggttaaaggc
ggcttcactgtcgacgttaacggcatccgtgcgttcctgccaggttccctggttgacgtc
cgtccagtgcgcgacaccacgcacctggaaggcaaagagctggaattcaaggtcatcaag
ctggaccagaagcgcaacaacgttgtcgtttcccgtcgcagtgtcctggaagccgagaac
tccgccgagcgtgaagctctgctggaatcgctgcaggaaggccagcaggtcaagggtatc
gtcaagaacctcaccgattacggcgcattcgtcgatctgggtggcgtcgatggcctgctg
cacatcaccgacatggcctggaagcgtatcaagcatccttcggaaatcgtcaacgttggc
gacgagatcgatgtcaaggttctgaagtacgatcgcgagcgcaatcgtgtttccctgggc
ctcaagcaactgggtgaagatccatgggtcgctatcaaagcccgttacccagaaggcact
cgcgtcaccgctcgtgttaccaacctgaccgactacggctgcttcgctgagctggaagaa
ggcgttgaaggcctggtacacgtttccgaaatggactggaccaacaagaacatccaccct
tcgaaagtcgtacaagtcggcgacgaagtggaagtcatggtcctggacatcgacgaagag
cgtcgtcgtatctccctcggcatcaagcagtgcaagtccaacccatgggaagacttctct
ggccagttcaacaagggcgataaaatctccggcaccatcaagtcgatcaccgatttcggt
atcttcattggtctggacggcggcatcgacggcctggttcacctgtccgacatctcctgg
aacgaagtgggcgaagaagccgtacgccgtttcaagaagggcgacgagctggacaccgtt
atcctgtcggttgacccagagcgcgagcgcatctccctgggtatcaagcaactggaaagc
gatccgttctccgagtacgttcaagagaacgacaaaggcgcaatcgttaagggcatcgtg
aaagaagttgacgccaaaggcgccatcatcaccctggccgacgatatcgaagcgactctg
aaagcctctgaaatcagccgtgaccgcgttgaagacgcgcgcaacgtcctgaaagaaggc
gaagaagtagaagccaagatcatcagcgttgaccgcaagagccgcgtaatccagctctcc
atcaagtcgaaagacgatgctgaagagaaagaagcaatccagagcctgcgcgacaagcca
gctactgacattgctgctggtcctaccactctgggcgacctgctgcgtgcacagatggaa
aagcagaactga
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