Pseudomonas alvandae B21-020: LOY40_20530
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Entry
LOY40_20530 CDS
T08625
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcas03032
]
LOY40_20530 (gyrA)
03400 DNA repair and recombination proteins [BR:
pcas03400
]
LOY40_20530 (gyrA)
Enzymes [BR:
pcas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LOY40_20530 (gyrA)
DNA replication proteins [BR:
pcas03032
]
Prokaryotic type
DNA Topoisomerases
LOY40_20530 (gyrA)
DNA repair and recombination proteins [BR:
pcas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LOY40_20530 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
UVM70956
LinkDB
All DBs
Position
complement(4597121..4599793)
Genome browser
AA seq
890 aa
AA seq
DB search
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSTVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPWESSA
VVAMVERAGADSCRPENLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSATRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEER
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVEEYTEGHYIFMATANGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLPEGQKLISMLIPEEGSQILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNER
NGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLAKDEKLVGLERV
QEPSEVEGEELEGEEGEEGVAFDGTLGADVDDTVGDQPLDAAADEEEPQD
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcaatgagcgtaatcgtcgggcgggcgctgccggatgcgcgcgatggc
ttgaagcccgtgcaccggcgcgtgctgttcgcgatgagcgagctgggcaacgacttcaac
aagccttacaagaagtccgcccgtgtcgtcggcgacgtgatcggtaagtatcacccccac
ggcgacactgccgtgtacgacaccatcgttcgtatggcgcagccattctccctgcgctac
ctgttggtggacggccagggcaacttcggttcggtggacggcgacaacgccgcggccatg
cgatacaccgaagtgcgcatgaccaagctggcccacgaactgctggccgacctgcacaag
gaaaccgtggactgggtgccgaactacgacggcaccgaaatgatcccggcggtcatgccg
acccgtattcccaacctgctcgtcaacggctccagcggtatcgccgtgggcatggcgacc
aacatcccgccacacaacctcggtgaagtcatcgacggttgcctggccctcatcgacaat
cccgagctgaccgtcgatgagctgatgcagtacatccccggtccggacttcccgaccgcc
gcgatcatcaacggtcgcgccggcatcatcgaggcctatcgcaccggtcgcggccgcatc
tacatgcgcgcccgctcgaccgtcgaagacatcgacaaggtgggtggccgccagcagatc
gtcatcaccgagctgccgtaccagctgaacaaggcccgcctgatcgagaagatcgccgag
ctggtaaaagagaagaagctcgaaggcatcaccgagctgcgtgacgagtccgacaaggac
ggcatgcgcgtcgtgatcgagctgcgccgtggcgaagtgccggaggtgatcctcaacaac
ctctacgcgcagacccaactgcaaagcgtgttcggcatcaacatcgtcgcgttgatcgac
ggccgtccgcggatcctgaacctcaaggacctgctggaagccttcgtccgtcaccgtcgc
gaagtggtcacccgtcgtaccgtattcgagctgcgcaaggcgcgcgagcgtggtcacatc
ctcgaaggccaggccgttgccctgtcgaacatcgacccggtcatcgccctgatcaaggct
tcgccaaccccgtcggaagccaaggaagcgctggtcagcacgccttgggaatcctccgcg
gtggtggcaatggtcgagcgtgccggcgccgattcgtgccgtccggaaaacctcgacccg
caatacggcctgcgcgaaggcaagtacttcctgtccccggagcaggcgcaagccatcctg
gaactgcgcctgcaccgcttgaccggcctggagcacgaaaagctgctggcggagtaccag
gaaatcctcaaccagatcggcgagctgatccgcatcctcaacagcgccacgcgcctgatg
gaagtgatccgcgaagaactggaagtgatccgcgccgaatacggcgacgtgcgccgcacc
gagatcctcgatgcgcgcctggacctgaccctgggcgacatgatcccggaagaagagcgc
gtggtgaccatttcccacggcggctacgccaagacccagccgctggccgcctaccaggcc
cagcgtcgcggtggcaaaggcaagtcggccacgggcgtcaaggacgaggactacatcgct
cacctgctggtcgccaacagccataccacgctgctgctgttctccagcaagggcaaggtg
tactggctgaagacctacgagatccccgaagcatcccgtgccgcccgcggtcgtccgctg
gtcaacctgttgccgctggatgatggtgaatacatcaccaccatgctgccggtggaggaa
tacaccgaaggtcactacatcttcatggcaaccgccaacggcaccgtgaagaagaccccg
ctggaatccttcagccgccagcgcagcgtgggcctgatcgccctggagctggacgaaggc
gacgtgctgatttccgccgccatcactgacggcgagcgcgaagtcatgctgttctccgac
ggtggcaaggtcacgcgcttcaaggaatccgacgttcgcgccatgggccgtaccgctcgc
ggtgtgcgcggcatgcgcctgccggaaggccagaagctgatttccatgctgatcccggaa
gaaggcagccagatcctcactgcttccgagcgtggctacggcaagcgtaccgccatcagc
gagttccccgagtacaagcgtggcggccagggcgtgatcgccatggtcagcaacgagcgt
aacggtcgcctggtcggtgctgtccaggtgctcgatggcgaggagatcatgctgatttcc
gaccagggcacgttggtgcgtacgcgggtcgacgaagtgtcgagcctgggccgtaacact
cagggcgtgacgctgatcaaactcgccaaagacgaaaaactggtcgggcttgagcgcgtc
caggaaccgtcggaagtcgaaggcgaggagctggaaggcgaagaaggcgaggaaggtgta
gcgttcgatggcaccctcggtgccgatgtcgacgacaccgtcggcgatcaaccactcgac
gctgccgcagacgaagaagaaccgcaggactaa
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