Pseudomonas alvandae B21-020: LOY40_21530
Help
Entry
LOY40_21530 CDS
T08625
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcas03016
]
LOY40_21530 (rnd)
Enzymes [BR:
pcas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LOY40_21530 (rnd)
Transfer RNA biogenesis [BR:
pcas03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LOY40_21530 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
UVM71145
LinkDB
All DBs
Position
complement(4828193..4829326)
Genome browser
AA seq
377 aa
AA seq
DB search
MAIDIHWIRDNDSLGRFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQIGDGKSAYLIDPL
TIDDWKPLAALLENPAVLKVLHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNLGFSMGY
SRLVQEVLGIELPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVQLRPKLSDEKYSWV
LEDGAELVANLRREVDPYEVYREAKLAWKLSRAQLAVLRELCAWREREARARDLPRNRII
REHSLWPLARTQPDNLGALAKIEDMHPRTVRQDGEFLLDLIKRAGSVPPEQWPAAVPEPL
PIEASALVKRLKALGQAEAERLGIAPELMLRKKTLEALIKSGFPEGPYQLPDSLRGWRRE
LMGQALLDSLATAGEQP
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtggccatcgatattcattggattcgcgacaacgatagcctcggtcggttttgcgccgaa
tggcaacagttgccgttcgtcgccctcgacaccgaattcatgcgggtcgacaccttttat
cccattgccggcctgctgcagatcggtgatggcaaaagtgcgtacctgatcgaccccttg
accatcgacgattggaaacccttggccgcgctgctggaaaacccggcggtgctcaaggtc
ttgcacgcctgcagcgaagaccttgaagtcttgctgcgcctgacaggcagcttgcccgcg
ccgctgttcgacacgcaattggccgccgcctacctgaacctgggtttctccatgggttat
tcgcggttggtgcaggaagtgctgggcatcgaattgcccaagggcgagacccgttccgac
tggttgcagcggcccttgtccgaaacccagatcagctatgccgccgaggatgccgtgcat
cttgcggaagttttcgtacaactgcggccgaagctgtccgacgaaaaatacagctgggtc
ctggaggatggcgccgaactggtggccaacctgcgccgcgaggtcgacccgtacgaggtg
taccgcgaggccaagctggcttggaagctgtcccgggcgcaattggccgtactgcgcgag
ctgtgcgcctggcgtgagcgcgaggcgcgcgcccgtgacctgccgcgcaaccgcatcatt
cgcgagcattcgctatggcccctggcccgcacgcagccggataacctcggtgcgctggcg
aagatcgaagacatgcacccgcgtaccgtgcgccaggacggtgaattcctgctcgacctg
atcaagcgtgcgggcagcgtgccacctgaacaatggccggccgcagtgcccgaaccgctg
ccgatcgaggcctcggcgctggtcaagcggctcaaggcgctggggcaggctgaagccgag
cgcctgggcattgccccggaactgatgctgcgcaagaaaaccctcgaggccctgatcaag
agcggctttcccgaggggccttaccaattgcccgattcgctgcgtggctggcgccgcgag
ttgatgggccaggcattgctcgacagcctggccaccgccggagaacagccttga
DBGET
integrated database retrieval system
