Pseudomonas alvandae B21-020: LOY40_22220
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Entry
LOY40_22220 CDS
T08625
Symbol
fadD2
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD2
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas00061
Fatty acid biosynthesis
pcas00071
Fatty acid degradation
pcas01100
Metabolic pathways
pcas01212
Fatty acid metabolism
pcas02024
Quorum sensing
pcas04146
Peroxisome
Module
pcas_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LOY40_22220 (fadD2)
00071 Fatty acid degradation
LOY40_22220 (fadD2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LOY40_22220 (fadD2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
LOY40_22220 (fadD2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pcas01004
]
LOY40_22220 (fadD2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcas04147
]
LOY40_22220 (fadD2)
Enzymes [BR:
pcas01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LOY40_22220 (fadD2)
Lipid biosynthesis proteins [BR:
pcas01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LOY40_22220 (fadD2)
Exosome [BR:
pcas04147
]
Exosomal proteins
Exosomal proteins of breast milk
LOY40_22220 (fadD2)
Exosomal proteins of breast cancer cells
LOY40_22220 (fadD2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
UVM71275
LinkDB
All DBs
Position
complement(4968350..4970038)
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AA seq
562 aa
AA seq
DB search
MQPDFWNDKRPAGVPLDIEQGAYKSVIEVFERSCKKFADRPAFSNMGVTLTYAELERYSA
AFAGYLQAHTDLAPGDRIAVQMPNVLQYPIAVFGALRAGLIVVNTNPLYTPREMRHQFKD
SGARALVYMNLFGQKVQEVLPDTDLQYLIEAKMGDLMPTAKGWLVNTVVNKVKKMVPAYS
LPQAISFKSALRLGRGQGIKPLNVSLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMQQAR
ACLGQIGDDGQPLLREGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIGGFI
KELKNWRFSLLLGLNTLFVALMDHPDFKTLDFSSLKVTNSGGTALVKATAERWKQLTGCG
ITEGYGLTETSPVASANPYGGKSRLGTVGLPVPGTLMKVINDDGVEMPLGERGELCIKGP
QIMKGYWNKPEATAEVLDSEGWFKSGDIAVIDPDGFVRIVDRKKDMIIVSGFNVYPNEIE
DVVMAHPKVASCAVIGVPDERSGEAVKLFVVAREAGVSLEELKAYCKENFTGYKVPKHIV
LRESLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctgatttctggaatgacaaacgcccagccggcgtgcccttggatatcgagcag
ggcgcctacaagtcggttatcgaggtgttcgagcgttcctgcaagaaatttgccgatcgt
ccggcgttcagcaacatgggggtgacgctcacctacgccgagctcgaacgctatagcgcg
gccttcgccggttacctgcaagcccataccgacctggcgccgggcgatcgcatcgcggtg
cagatgcccaatgtcctgcaatacccgatcgctgtcttcggtgccctgcgcgccggactt
atcgtggtcaataccaacccgctgtacaccccgcgggaaatgcgccatcagttcaaggac
tccggtgcccgggcgctggtgtacatgaacctgttcgggcagaaggtccaggaagtgctg
ccggacaccgacctgcaatacctgatcgaagcgaagatgggcgacctgatgcccaccgcc
aagggctggctggtgaataccgtggtgaacaaggtcaagaaaatggtcccggcctattcg
ctgccacaggccatttccttcaagagcgccttgcgcctgggacgcggccagggcatcaag
ccgttgaacgtcagcctcgacgacatcgccgtgctgcaatacaccggtggcaccaccggc
ttggcgaagggcgcgatgctgacccacggcaacctggtggccaacatgcaacaggcccgc
gcttgcctggggcagatcggcgacgacggccagccactgttgcgcgaaggtcaggaggtc
atgatcgcgccgctgccgctgtaccacatctatgctttcacggcgaactgcatgtgcatg
atggtcaccggcaatcacaacgtgctgatcaccaatccgagggacatcggcggttttatc
aaggagctgaagaactggcggttttcgctgctgctggggctcaacacgttgtttgtggcg
ctgatggaccacccggatttcaagacgctggatttctccagcctcaaggtcaccaactcg
ggcggcaccgcgttggtcaaggccaccgccgaacgctggaaacagctcaccggttgcggc
attaccgagggctacggcctgaccgaaacttcgccggtggccagcgccaacccttatggc
ggcaagtcgcgcctggggacggtagggctgccggtgccgggtacgctgatgaaggtcatc
aacgacgacggcgtcgagatgcccctcggtgaacgcggcgagctgtgcatcaaggggccg
cagatcatgaaaggctattggaacaagcccgaagcgactgccgaagtgctggacagcgag
ggctggttcaagtccggtgatatcgcagtgatcgaccccgacgggttcgtgcggatcgtc
gaccgcaagaaggacatgatcattgtctcgggtttcaacgtgtacccgaacgaaatcgag
gatgtggtgatggcccatccgaaagtcgccagttgcgcggtgatcggcgtgccggacgag
cgctcgggggaggcggtgaagctgttcgtggtcgcccgtgaggccggggtcagcctcgaa
gaactcaaggcgtactgcaaggaaaacttcaccggctacaaggtgcctaagcacatcgtg
ttgcgtgagtcgctgccgatgacgccggtgggcaagatcctgcgtcgggagttgcgcgat
atcgcctga
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