Pseudomonas alvandae B21-020: LOY40_22955
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Entry
LOY40_22955 CDS
T08625
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LOY40_22955 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcas03400
]
LOY40_22955 (mutS)
DNA repair and recombination proteins [BR:
pcas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LOY40_22955 (mutS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
UVM71409
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Position
5114190..5116757
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AA seq
855 aa
AA seq
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MNDLSSHTPMMQQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAG
MAIPMCGIPYHAAEGYLAKLVKLGESVVICEQVGDPATSKGPVERQVVRIITPGTVSDEA
LLDERRDNLIAAVLGDERLFGLAVLDITSGNFSVLEIKGWENLLAELERVNPVELLIPDD
WPKDLPAEKRRGVRRRAPWDFERDSALKSLCQQFSTQDLKGFGCENLTLAIGAAGCLLAY
AKETQRTALPHLRSLRHERLDDTVVLDGASRRNLELDTNLAGGRDNTLQSVVDRCQTAMG
SRLLTRWLNRPLRDLTVLTARQSSITCLLDRYRFEQLQPQLKEIGDIERILARIGLRNAR
PRDLARLRDALGALPELQVAMTDLEAPHLQQLARITSTYPELAALLEKAIIDNPPAVIRD
GGVLKTGYDAELDELQSLSENAGQFLIDLEAREKARTGLANLKVGYNRIHGYFIELPSKQ
AEQAPADYIRRQTLKGAERFITPELKAFEDKALSAKSRALAREKMLYEALLEDLISQLPP
LQDTAAALAELDVLSNLAERALNLDLNCPRFVSEPCMRISQGRHPVVEQVLTTPFVANDL
SLDDNTRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSD
DLAGGRSTFMVEMSETANILHNATERSLVLMDEVGRGTSTFDGLSLAWAAAERLAQLRAY
TLFATHYFELTVLPESQPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVP
SDVISRAREHLSRLETTSLPHEAPRPTKGKPAAPQQSDLFASLPHPVLDELAKLDLDDLT
PRRALELLYTLKTRI
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacctgtcctcccacacgccgatgatgcagcaatactggcgcctgaagaaccag
caccccgatcagctgatgttctaccgcatgggcgacttctacgagatcttctacgaggac
gcgaagaaggccgccaagctgctggacatcaccctgacggcgcgtgggcagtcggcgggc
atggcgattccgatgtgtgggattccttaccacgcagcggaaggttacctggcgaaactg
gtcaagcttggcgagtccgtggtgatctgcgaacaagtcggcgacccggccaccagcaaa
ggcccagtggaacgccaagtcgtgcggatcatcaccccgggtacggtcagtgacgaagcc
ttgctggacgagcgccgggacaacctcattgccgcggtcttgggcgacgagcggctgttt
ggcctggccgtgctggacatcaccagcggcaatttctcggtgctggaaatcaagggctgg
gaaaacctgctggcggagctggagcgggtcaacccggtggagctgttgattcctgatgat
tggcccaaggacctgccggcggaaaaacgccgtggcgtacgtcgtcgggcgccgtgggat
ttcgagcgcgactcggcgctgaaaagtctttgccagcagttttccacccaggatctgaag
ggttttggttgcgagaacctgaccctggccatcggcgcggccggttgcctgctggcctac
gccaaggaaacccagcgcaccgccctgccccacttgcgcagcctgcgtcacgaacgcctg
gatgacacggtggtgctggacggcgcaagccgacgcaacctggagctggacaccaacctg
gccggcggccgcgacaacaccttgcaatcagtggtcgatcgctgccagaccgccatgggc
agccgcctgctgacccgctggttgaaccgtccgctgcgggacctgacagtactgacagcg
cgccagtcctccattacctgcctgctggaccgttatcgcttcgaacaattgcaaccgcag
ctcaaggaaatcggcgacatcgagcggatcctcgctcgtatcggcctgcgcaacgcccgt
ccccgcgacttggcgcgcctgcgcgatgctctcggcgcgttgcccgaactgcaagtcgca
atgaccgacctcgaagcgccgcacctgcaacaactggcgcgcatcaccagcacctacccg
gagctggccgcgctgctggaaaaagccattatcgacaacccgcccgcggtgatccgtgac
ggtggcgtgctgaaaaccggctacgacgccgagctcgacgagttgcaatcgctgagcgag
aacgccggccagttcctgatcgacctcgaagcccgggaaaaagcccgtaccggcctggcc
aacctcaaggtcggctacaaccgcatccacggttacttcatcgaactgccgagtaagcag
gccgaacaggccccagccgactacattcgccgccagaccctcaagggtgcggagcgtttc
atcacgccggagctcaaggcgttcgaagacaaggcgctgtcggccaagagccgcgccctg
gcccgggaaaaaatgctctacgaagcgctgcttgaagacttgatcagccaactgccgccg
ttacaggacaccgccgccgccctggcggaactggacgtgctgagcaacctggccgaacgc
gcgctcaacctggacctcaactgcccacgtttcgtcagcgagccgtgcatgcgcatcagc
cagggtcgtcacccggtggtcgagcaagtgctgactacgccgttcgtggccaacgacctg
agcctggatgacaacacccgcatgctggtgatcaccggtccgaacatgggcggtaaatcc
acctacatgcgccagaccgcgttgatcgtgctgctggcccacatcggcagctttgtgccc
gcggccagctgcgaattgtcgttggtagaccgcatcttcacccggatcggctccagtgat
gacttggccggtggtcgttcgacgttcatggtggaaatgagtgaaaccgcgaacatcctg
cacaacgccaccgagcgcagcctggtgctgatggacgaagtcggtcgcggcaccagcacc
ttcgacggcttgtccctggcttgggctgcggcagaacgtctcgcccagttgcgggcctac
acgctgttcgccacgcactacttcgaattgacggtgctgccggagagccaaccgctggtg
gccaacgttcacctcaacgccaccgagcacaacgaacgcattgtgttcctgcaccatgtc
ctgcccggcccggcgagtcagagctacggattggcggtggcgcagttggccggcgtgcca
agcgacgtgatcagccgcgcccgcgagcacctgagccgcctggaaaccaccagcctgccc
catgaagcaccgcgcccgaccaaaggcaaaccggccgcgccgcagcaaagcgatctgttc
gccagcctgccgcatccggtgctcgatgaactggccaagctcgatctggatgacctgaca
ccacgccgtgcactcgaattgctttatacattgaagacacggatctaa
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