Pseudomonas alvandae B21-020: LOY40_23045
Help
Entry
LOY40_23045 CDS
T08625
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas03030
DNA replication
pcas03430
Mismatch repair
pcas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOY40_23045 (dnaE)
03430 Mismatch repair
LOY40_23045 (dnaE)
03440 Homologous recombination
LOY40_23045 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcas03032
]
LOY40_23045 (dnaE)
03400 DNA repair and recombination proteins [BR:
pcas03400
]
LOY40_23045 (dnaE)
Enzymes [BR:
pcas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOY40_23045 (dnaE)
DNA replication proteins [BR:
pcas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LOY40_23045 (dnaE)
DNA repair and recombination proteins [BR:
pcas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LOY40_23045 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
BTB-POZ_ANK-like
HROB
Motif
Other DBs
NCBI-ProteinID:
UVM71425
LinkDB
All DBs
Position
complement(5134022..5137543)
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLVKTLVGMNMPAVAVTDQNNMCSLVKFYKNAMGAG
IKPICGADLWLANKDPDAPLSRISLLVMNALGYRNLTELISRGFIDGQRNGSIIIEREWV
AEASEGLIMLSAAKEGEIGQALLSGNVEEAEQLARDWMAVFPDRFYIEVQRTNRPNDEEH
LHAAVALADKLGAPLVATNDVRFIKQEDFEAHETRVCIGEGRALDDPRRPKNYSDQQYLK
SAEEMAELFSDLPEALENTVEIAKRCNIEVKLGKHFLPNFPIPDGMTIDEYFRKVSFDGL
EERLSVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKSNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYV
AEKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFIKVDEEAAEIWEMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEEGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVGEEPLDIAFIPLDDKPTYS
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHPDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCANNGIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNASEFKFTVNEEGRIIYGLGAI
KGVGEGPVEAITEARQDGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFHDEP
KAYQANIDRNRAVLLAAMEEAIKAAEQTARTHDSGHADLFGGLFVEEDADVYGNHRKAKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFADAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
VKRVMSMEDARTNLAESLRLKLQTQDLKGDQLRWLGELFKRHRGACPITMEYVRPDAKAV
LQFGEGWRIDPADALIQALRDQFGKDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcatctacgcctgcacactgaatactccctggtcgacggtctg
gtgcggatcaagcccctggtcaagacgctggtgggcatgaacatgcctgccgtggccgtt
accgaccagaacaacatgtgttcgctggtcaagttctacaagaacgccatgggcgcaggg
atcaagccgatctgcggcgccgacctgtggctggcgaacaaggacccggacgcgccgctg
agccgaatcagcctgctggtgatgaacgccttgggctaccgcaacctcaccgagctgatt
tcccgcggctttatcgacggccagcgcaatggctcgatcatcatcgagcgcgagtgggtg
gccgaggccagcgaagggctgatcatgctgtcggcggccaaggagggtgaaatcggccag
gccctgctcagcggcaatgtcgaagaagccgaacaactggcccgcgactggatggccgtg
ttcccggatcgcttctacatcgaagtgcagcgcaccaaccgtcccaatgacgaagaacac
ctgcacgccgccgtagccctcgccgacaagctcggtgcgccgctggtggcgaccaacgac
gtgcggttcatcaagcaggaagatttcgaggcccacgaaacccgcgtctgcatcggtgag
ggccgggccctcgacgacccccgtcggccgaaaaactacagcgaccagcaatatctcaag
agcgccgaggaaatggcggagctgttcagcgacttgcccgaagcgctggaaaacaccgtc
gagatcgccaagcgttgcaacatcgaagtgaagctgggcaagcacttcctgcccaacttc
ccgattcccgatgggatgaccatcgatgaatatttccgcaaggtctcgttcgacggcctc
gaagaacgcctgagcgtcctgctgcccaaggacaccactgaagattacgaagccaagcgc
caggtctatgtcgatcggttgaatttcgagctggatatcatcatccagatggggttcccc
ggttacttcctgatcgtgatggactttatccagtgggccaagagcaacggcgtgcccgtt
ggccctggccgggggtcgggtgccggttcgctggtggcctacgtgcagaagatcaccgac
ctcgacccgctggaatatgacctgctgttcgaacgtttcctcaacccggaacgggtttcc
atgcccgacttcgacgtcgacttctgcatggacggccgcgaccgggtgatcgactacgtg
gccgagaaatacggccgcaacgcggtgagccagatcattaccttcggttccatggctgcc
aaggctgtggtgcgcgacgtggcgcgggtgcagggcaagtcctacggtctggcggatcgc
ctgtcgaagatgatcccgttcgaagtcggcatgaccctggaaaaagcctacgagcaggaa
gaaatcctgcgggacttcatcaaggtcgatgaggaagctgcggaaatctgggagatggcc
cgcaagctcgaaggcgtggtgcgtaacgtcggcaagcacgccggtggtgtggtgatcgcg
ccgaccaagctgactgacttctcgccgatctattgcgatgaagagggcgacggcctggtc
acccagttcgacaaggatgacgtcgaggcggcgggcctggtgaagttcgacttcctcggc
ttgcggaccctgaccatcatcgactgggcgctgaaaaccatcaaccgcgaccgggccaag
gtcggcgaagagccgctggacattgcctttattccgctggacgacaagccgacctacagc
ctgttgcagaaagccgaaaccaccgcggtgttccagcttgaatcccgaggcatgaaggag
ctgatcaagaagctcaagcccgactgcctggaagacttgatcgcactggtggccctgttc
cgtccgggcccgctgcaatcgggcatggtggatgacttcatcaaccgcaagcacggtcgc
gccgagctggcgtacccgcaccccgactaccagtacgaaggcttgaagccggtattggca
ccgacctacggcatcatcctgtatcaggaacaggtgatgcagattgcccaggtgatggcc
ggctacaccctcggtggcgcggacatgctgcgtcgagccatgggtaagaaaaaacccgag
gagatggccaagcagcgcggtggcttcatcgaaggttgcgcgaacaacggcatcgatgcg
gacctggcgggcaacattttcgacctggtggaaaagttcgccggctacggcttcaacaaa
tcccactccgccgcctatggcctggtctcgtaccagaccgcatggttgaaggcacactac
ccggcgccgttcatggcggcggtactgtccgcggacatgcacaacaccgacaaggtcgtg
accttgatcgaagaagtgcggaccatgaagctgcgcctcgacgcaccggacgtgaacgca
tcggagttcaagttcacggtgaacgaggaaggccgcatcatctatggcctcggcgccatc
aagggcgtgggcgaggggccggtggaagccatcaccgaagcgcgccaggacgggccattc
aaggatctgttcgatttctgcgcgcgggttgacctcaagcgcatcaacaagcgcaccctc
gacggtttgatccgcagcggcgcgctggaccgcctggggccttacttccacgatgagccg
aaggcctaccaggccaacatcgatcgcaatcgcgcggtgttgctggcggcgatggaagaa
gcgatcaaggccgccgaacagaccgcccgcacccatgacagcggccacgccgacctgttt
ggcgggctgttcgtcgaggaagacgccgacgtctatggcaaccatcgcaaagccaaggag
ctgaccctcaaggagcgcctcaagggtgagaaagacaccttgggcctgtacctgaccggt
cacccgatcgacgaatacgaaggcgagatccgccgcttcgcccgccagcgcatcatcgac
ctgaagccggctcgcgacacgcaaacggtcgccggcatgatcatcgccctgcgggtgatg
aaaaacaaaaaaggcgacaagatgggtttcatcaccctggacgaccgctccgggcgcatc
gaggcgtcgttgttcgccgatgcgttccattccgcgcagtcgttgttgcagaccgatgcg
atggtcgtcgtggaaggggaagtcagtaacgacgacttctccggtggcctgcggctgcgg
gtcaagcgcgtgatgagcatggaggatgcccgtaccaacctggccgagagcctgcgcctg
aagttgcaaacccaggatctgaaaggcgatcagctacgctggctgggcgagttgttcaag
cgccatcgcggtgcttgtccgatcaccatggagtatgtacgacccgacgccaaggccgtg
ctgcagttcggcgaaggttggcggatcgatccggcggatgcgttgattcaagccttgcgt
gaccagttcggcaaagacaacgtcttcctccaataccgttga
DBGET
integrated database retrieval system
