Pseudomonas alvandae B21-020: LOY40_23185
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Entry
LOY40_23185 CDS
T08625
Symbol
tcdA
Name
(GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcas03016
]
LOY40_23185 (tcdA)
Transfer RNA biogenesis [BR:
pcas03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LOY40_23185 (tcdA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiF
3HCDH_N
Sacchrp_dh_NADP
NAD_binding_7
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
UVM71451
LinkDB
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Position
complement(5166234..5167052)
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AA seq
272 aa
AA seq
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MVMSTEDPRFAGIARLYGIEGLERLRAAHVAIVGVGGVGSWAAEAIARCGVGEISLFDLD
DVCVSNANRQLHALDSTVGKPKVEVMAERLRGINPDCTVHAVADFVTRDTMAEYITPNID
CVIDCIDSVNAKAALIAWCKRRKIQIITTGGAGGQIDPTLIQVCDLNRTFNDPLASKVRS
TLRRDYGFSRTVTRHYSVPCVFSTEQLRYPKPDGSICLQKSFVGDGVKLDCAGGFGAVMM
VTATFGMVAATKAVDKIVAGVRRPADRTKPGQ
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggtcatgagtacagaagatccacggtttgccggcatcgcccgtttgtatggcatcgaa
ggcctggagcgcctgcgggcggcccatgtggcgattgtcggcgttggcggtgtcggctcc
tgggcggcggaggccatcgcccgttgcggcgtgggcgagatttcgctgttcgacctggac
gatgtctgcgtcagtaacgccaaccgtcagttgcacgccctggacagcaccgtcggcaaa
cccaaggtcgaagtgatggccgagcggctgcgcgggatcaaccccgactgcaccgtgcac
gcggtggccgactttgtcacccgcgacaccatggccgagtacatcacgccgaacatcgat
tgcgtgatcgactgcatcgacagcgtcaacgccaaggccgcgctgatcgcctggtgcaag
cgccgcaagatccagatcatcaccaccggcggcgcgggcgggcagatcgacccgacgctg
atccaggtctgcgacttgaaccgtacgttcaacgatccgctggcctccaaggtgcgctcc
accttgcgccgcgactacggcttctcccgcaccgtgacccgccactacagcgtgccttgc
gtgttctccaccgaacaactgcgctacccgaaaccggacggcagcatttgcttgcagaag
agtttcgtcggcgacggcgtcaagctcgactgcgccggcgggtttggcgcggtgatgatg
gtcacggcgacgttcggcatggtcgcggcgacgaaggctgtggataagattgtcgcgggc
gtgcggcgaccggcggacaggaccaagcccggacagtaa
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