Pseudomonas canavaninivorans: LOY40_23190
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Entry
LOY40_23190 CDS
T08625
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pcas
Pseudomonas canavaninivorans
Pathway
pcas00300
Lysine biosynthesis
pcas01100
Metabolic pathways
pcas01120
Microbial metabolism in diverse environments
pcas01230
Biosynthesis of amino acids
Module
pcas_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LOY40_23190 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcas01002
]
LOY40_23190 (dapE)
Enzymes [BR:
pcas01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
LOY40_23190 (dapE)
Peptidases and inhibitors [BR:
pcas01002
]
Metallo peptidases
Family M20
LOY40_23190 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BNR_2
Motif
Other DBs
NCBI-ProteinID:
UVM71452
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Position
5167355..5168506
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AA seq
383 aa
AA seq
DB search
MTAHADLSPTLQLACDLIRRPSVTPADADCQKLMMQRLGDAGFKLEPMRIEDVDNFWASH
GKQDGPVLCFAGHTDVVPTGPVQAWQLDPFDAVIDEQGMLCGRGAADMKGSLAAMVVAAE
RFVADYPDHKGSLTFLITSDEEGPAHHGTKAVVERLKARQERLDWCIVGEPSSTTLVGDV
VKNGRRGSLGAKLTVRGKQGHVAYPHLAKNPIHLAAPALAELAAEHWDHGNDFFPPTSFQ
ISNLNSGTGATNVIPGDLVAVFNFRFSTESTVEGLQQRVAAILDKHQLDWHIDWALSGLP
FLTEPGALLDAVSSSIKDVTGRETKASTSGGTSDGRFIATMGTQVVELGPVNATIHQVNE
RVLAADLEVLTEIYYKTLIKLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccacgccgacctctcgccgaccctgcaactcgcctgcgacctgatccgccgc
ccgtccgtgacgccggccgacgccgattgccagaaactgatgatgcagcgcctgggcgac
gccggtttcaaactggagccgatgcgcatcgaggatgtggataacttctgggccagccat
ggcaagcaggacggcccggtgttgtgcttcgccggtcacaccgatgtggtgccgaccggc
ccggtgcaggcttggcaactcgacccgttcgatgcggtcatcgacgaacagggcatgctc
tgcggccgtggcgcggcggacatgaaaggcagcctggcggcgatggtggtggcggccgaa
cggttcgtcgccgactacccggaccacaagggctcgctgaccttcctgatcaccagcgat
gaagaaggcccggcccaccacggcaccaaagccgtggtcgaacgcctcaaggcccgccag
gagcgactggactggtgcatcgtcggcgagccgtcgagcaccacgctggtgggcgatgtg
gtcaagaatggccggcgcggttccctcggcgcgaagttgaccgtgcgcggcaagcaaggc
cacgtggcttatccacacctggcgaagaacccgatccacctggccgcgccagccctggca
gaactggccgccgagcattgggaccatggcaacgacttcttcccgccgaccagtttccag
atctccaacctcaattccggcaccggcgcgaccaacgtgatccccggtgacctggtggcg
gtgttcaacttccgcttctccaccgaatccaccgtcgaaggcctgcaacagcgcgtcgcc
gccatcctcgacaagcatcaactggactggcacatcgactgggccttgtccggcctgccg
ttcctcactgagccgggtgccttgctggacgccgtgtcatcgagcatcaaggacgtgacg
ggccgcgagaccaaagcctccaccagcggcggcacttcagatggtcgtttcatcgccacc
atgggcacgcaggtcgtggagctggggccggtcaacgcgaccatccaccaggtcaacgaa
cgcgtgctggcggccgatctcgaagtgctgaccgagatctactacaagacgctgatcaag
ttgctcgcctga
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