Pseudomonas alvandae B21-020: LOY40_23350
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Entry
LOY40_23350 CDS
T08625
Name
(GenBank) hybrid sensor histidine kinase/response regulator
KO
K13490
two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas02020
Two-component system
pcas02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LOY40_23350
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LOY40_23350
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pcas01001
]
LOY40_23350
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pcas02022
]
LOY40_23350
Protein kinases [BR:
pcas01001
]
Histidine kinases
CheA family [OT]
LOY40_23350
Two-component system [BR:
pcas02022
]
CheA family
WspE-WspRF (chemosensory)
LOY40_23350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
CheW
Hpt
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
UVM71483
LinkDB
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Position
complement(5200330..5202600)
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AA seq
756 aa
AA seq
DB search
MTPDQMRDASLLELFSLEAEAQTQVLSAGLLALERDPTQADHLESCMRAAHSLKGAARIV
GVDAGVSVAHVMEDCLVSAQERRLVLRAEHIDALLQGTDLLTRIATPGNSVSAEDIEAYV
GLLGHLLDPSATPAPTPTVMAPTIEIPAEPVRSEAPEPMSMEPLEPTAKKKRTTEGGERV
LRVTAGRLNSLLDLSSKSLVETQRLKPWLATMQRIRRQQSNGLRALEDLNVHLKDHALSL
QAQEALNDARRLLAETQQMLAQKTAELDEFAWQASQRAQVLYDTALACRMRPFADVLAGQ
ARMVRDLGRSLGKQVRLEIEGEKTQVDRDVLEKLEAPLTHLLRNAVDHGIEMPEQRVLAG
KPAEGLIRLRASHQAGLLVLELADDGAGVDLERVRRTIVERGLSPEQTAASLSEEELLTF
LFLPGFSLRDKVTEVSGRGVGLDAVQHMVRQLRGAVVLEQTAGAGSRFHLEVPLTLSVVR
SLVVEVGGEAYAFPLAHIERMCDLAPQDIVQVEGRQHFWHEGRHVGLVAATQLLNRPVTP
NNGQVLKVVVIREREVIYGVAVERFIGERTLVVLPLDERLGKVQDISAGALLDDGSVVLI
VDVEDLLRSVDKLLDTGRLERIARQNEAQAPRKRILVVDDSLTVRELERKLLLNRGYDVA
VAVDGMDGWNALRSEDFDLLITDIDMPRMDGIELVSLLRRDNRLQSLPVMVVSYKDREED
RRRGLDAGADYYLAKASFHDDALLDAVVELIGGARA
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgaccagatgcgcgatgcctcgttgctggagctgttcagcctggaagccgaa
gcccagacccaggtattgagtgccggtttgctggccttggagcgcgatccgacccaggcc
gatcacctggagtcgtgcatgcgtgcggcccattcgctcaagggcgcggcgcgaatcgtc
ggggtcgatgccggcgtcagcgtggcccatgtgatggaagattgcctggtcagcgcccag
gagcggcggctggtcttgcgcgccgagcatatcgacgcgctgctgcagggcacggacttg
ctgacgcgtatcgcgacccccggcaacagcgtttctgccgaggacatcgaggcctatgtc
gggttgttgggacacctgctggatccgtccgcaacgccagctccgactcccaccgtcatg
gcgccgaccatcgagatacccgccgaacccgtgcgtagcgaagcgcccgagccgatgtcc
atggaaccgctggaaccgaccgccaagaaaaaacgcaccaccgagggcggcgagcgcgtc
ttgcgggtcacggccggacgccttaacagcctgttggacctgtcgagcaaatccctcgtc
gaaacccagcgcctcaagccctggctggcgacgatgcaacggatcaggcgccagcaaagc
aatggcctgcgcgccctcgaagacctgaacgtgcatctcaaggatcacgcgctgagcctg
caagcccaggaagccctcaacgatgcgcggcggctgctggccgaaacccaacagatgctc
gcgcagaaaaccgctgagctggatgagttcgcctggcaggccagccagcgggcacaagtg
ttgtacgacacggcactggcctgtcgcatgcgaccgtttgccgatgtgcttgcggggcag
gcgcggatggtgcgggacttggggcgcagcctgggcaaacaggtgcgcctggaaatcgaa
ggcgagaaaacccaggtcgatcgcgacgtactggaaaaactcgaggcgccgctgacgcat
ctgctgcgtaacgccgtcgaccacggcatcgagatgcccgagcaacgggtgctggcaggc
aagcccgccgaaggcttgattcgcctgcgcgcctcccatcaggccggcctgttggtactg
gaactggcggatgatggcgcgggcgtggacctggagcgggtgcggcggacgattgtcgag
cgcgggctttctcccgagcagaccgccgccagcctgagcgaagaggaactgctgaccttc
ctgttcctgccgggcttcagcctacgggacaaggtcactgaagtgtccgggcgcggagtc
ggcctggatgcggtccagcatatggtccggcagttgcgcggcgcggtggtgttggagcag
acggcgggcgccggcagtcgtttccacctggaagtgccgctgacgttgtcggtggtgcgc
agcctggtggtggaagtcggcggcgaagcctacgcgttccccttggcccatatcgagcgc
atgtgcgacctcgcgccgcaagacatcgtccaggtcgaaggccgccagcacttctggcat
gaggggcgccatgttggcctggtggccgccacgcaattgctcaatcgtccggtgacgccc
aacaacggccaggtcctcaaggtcgtggtgatccgcgaacgagaggtcatctatggcgtc
gcggtggaacggttcatcggtgagaggacgctggtggtgttgccgttggacgagcgcctg
ggcaaggtccaggacatttccgccggcgccttgctcgacgacggctcggtggtgctgatt
gtcgacgtcgaagacctgctgcgctcggtggacaagctgctcgataccggacgattggaa
cgcatcgcccggcaaaacgaagcccaggccccgcgcaagcggatcctggtggtcgatgac
tccctgacggtgcgagaactggagcgcaagctgctgctcaatcgcggctatgacgtggca
gtggcggtggatggcatggacggctggaacgcgttgcgctcggaggatttcgatttgctc
attaccgacatcgacatgccgcgcatggacggtatcgaattggtgtcgctgctgcggcgc
gacaaccgcttgcaatcgctgccggtgatggtggtttcctacaaggatcgcgaagaagat
cgccgccgcggcctggacgccggggccgactattatctagccaaggcgagtttccatgac
gacgccttgctcgacgccgtggtcgaattgatcggaggagcacgcgcttga
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