Pseudomonas alvandae B21-020: LOY40_23395
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Entry
LOY40_23395 CDS
T08625
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LOY40_23395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcas02000
]
LOY40_23395
Transporters [BR:
pcas02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LOY40_23395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_16
AAA_22
AAA
nSTAND_NTPase5
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UVM71492
LinkDB
All DBs
Position
5211900..5212934
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AA seq
344 aa
AA seq
DB search
MTLAVQFTHVSRQFGEVKAVDRVSIDIQDGEFFSMLGPSGSGKTTCLRLIAGFEQPSAGS
IRIHGEEATGLAPYQRDVNTVFQDYALFPHMNVRDNVAYGLKVKGVAKAERIKRADEALE
MVALGGYGERKPVQLSGGQRQRVALARALVNRPRVLLLDEPLGALDLKLREQMQGELKKL
QRQLGITFIFVTHDQTEALSMSDRVAVFNKGRIEQVDTPRNLYMKPATTFVAEFVGTSNV
IRGELARQLSGHPQPFSIRPEHVRFAEGPLAGHEIEIQGLLHDIQYQGSATRYELKLDNG
QTLNLSQANTQWVDNATQYQTGQQLTVRWAREAMIALNDTGAEV
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttgcagtccagttcacccacgtttcccgtcagttcggcgaggtgaaggccgtt
gaccgggtctccatcgatatccaggacggcgagttcttttccatgctgggcccttccggc
tcgggcaagaccacgtgcctgcggctgatcgccgggttcgagcagcccagtgccggttcg
atccgcatccacggtgaagaagccaccgggctcgcgccttatcagcgcgacgtcaacacg
gttttccaggactacgccctcttcccccacatgaacgtgcgcgacaacgtggcctacggt
ttgaaagtcaaaggcgtggccaaggcagaacgaatcaagcgcgccgacgaagcgctggag
atggttgccctgggcggctatggcgagcgcaagccggtgcagctttcaggcggccagcgc
caacgcgtcgccctggcccgcgcgctggtcaatcgtcctcgggtgttgctgctggatgaa
ccgctgggcgccctcgacctgaagttgcgcgaacaaatgcagggcgagttgaagaagctg
caacgccagctgggcatcaccttcattttcgtcacccacgaccagaccgaagcgctgtcg
atgtcggatcgcgtcgcggtcttcaacaaaggtcggatcgaacaagtcgataccccacgc
aacctctatatgaaaccggcaaccaccttcgttgccgagttcgtcggcacctccaacgtg
atccgtggcgaactggcccggcaattgagcggtcatccacagccgttttcgattcgcccg
gagcatgtgcgtttcgccgaaggcccgctggccggccatgaaatcgaaatccagggcctg
ctccatgacatccagtaccagggcagcgccacgcgttacgagctgaaactcgacaacggc
cagacgctgaacctcagccaggccaatacccaatgggtggacaacgcgacccaataccag
accggccagcagctcaccgtgcgctgggcccgcgaggcaatgatcgccctgaatgacacc
ggggccgaggtctga
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