Pseudomonas alvandae B21-020: LOY40_23475
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Entry
LOY40_23475 CDS
T08625
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcas03036
]
LOY40_23475 (xerD)
Chromosome and associated proteins [BR:
pcas03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
LOY40_23475 (xerD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
MrpR_C_cat
Motif
Other DBs
NCBI-ProteinID:
UVM71508
LinkDB
All DBs
Position
complement(5230501..5231397)
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AA seq
298 aa
AA seq
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MPAIDHPLIDQFLDALWLEKGLSDNTRGAYRSDLALFNGWLQEKNLELVSAGRELILDHL
AWRLEQNYKPRSTARFLSGLRGFYRYLLREKLIAVDPTLRVEMPQLGRPLPKSLSEADVE
ALLAAPDLSDPIGQRDRAMLEVLYACGLRVTELISLTLEQVNLRQGVLRVMGKGSKERLV
PMGEEAIVWVERYMRDARHDLLGGRPSDVLFPSLRGEQMTRQTFWHRIKHQAKVAGINKS
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQDLHAKHHPRG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccatcgatcatccgctcatagaccagtttctcgacgccctgtggctggaaaaa
gggctttccgataacacccgcggcgcctatcgcagcgacctggccctgttcaacggctgg
ttgcaggaaaagaacctggagttggtaagcgccgggcgggaactgatcctcgatcatctg
gcgtggcgcttggagcagaactacaaaccgcgctccactgcccgatttctttccggtttg
cgtgggttttatcgctatttgctgagagaaaagttgatcgcggtggacccgaccttgcgc
gtggaaatgccgcagctggggcgtccgctgcccaaatccttgtcggaggcagacgtggag
gcgttgctggcggcccccgacctcagcgaccccatcggccagcgtgatcgggccatgctg
gaagtcctgtatgcctgtggcctgcgcgtcactgagttgatcagcctgacgctcgaacag
gtgaacctgcgccagggcgtgctgcgggtgatgggcaagggcagcaaggaacgcctggtg
ccgatgggcgaggaggcgatcgtctgggttgagcgttacatgcgcgatgcccgtcatgat
ctgctgggcgggcgtcccagcgacgtgctgtttcccagcttgcgcggcgagcagatgacc
cgccagaccttctggcaccgcatcaagcaccaggccaaggtagccgggatcaataaatcg
ctttccccgcacaccttgcggcatgccttcgccacgcacctgctcaatcacggcgccgac
ttgcgagtggtgcagatgctgctggggcacagcgatctatccacaacccagatctacacc
catgtggcccgggcgcggttgcaggacttgcatgccaagcaccatccccggggctga
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