Pseudomonas alvandae B21-020: LOY40_24740
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Entry
LOY40_24740 CDS
T08625
Name
(GenBank) PilC/PilY family type IV pilus protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcas02044
]
LOY40_24740
02035 Bacterial motility proteins [BR:
pcas02035
]
LOY40_24740
Secretion system [BR:
pcas02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
LOY40_24740
Bacterial motility proteins [BR:
pcas02035
]
Pilus system
Pilus assembly proteins
LOY40_24740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
DUF7456
Motif
Other DBs
NCBI-ProteinID:
UVM71740
LinkDB
All DBs
Position
complement(5495301..5498393)
Genome browser
AA seq
1030 aa
AA seq
DB search
MRNIRALLGAVWGALLSLYLAAPVYGFTPSESPLLSAAAVTPNVMLLIDDSGSMNNIIWA
AGFDPAATQTRTFACNSSSSCNDRYELDLDDSNILLVSLLRGGCSSGWYGFYRASIGRVC
LRLPDPVGGGNTRYTARYLAYLVTLANGSSRDFTTGTIPNDYRVNVARDVSTDLVANNRA
LRIGLATFNPPNSSNSGPGGYIARAISDLSPVSGSVTQTQANANYTALINAINALGAVAN
TPLAESYYEVTRYFRGMAPFYNVTPSTYTSPIQYRCQKNFGVVITDGLPTYDRTFPTNDP
LGGSRLPNWDGISTNDGADPAGDGEGDTLYLDDIAKFAFDIDMRTTGTDVTGKSWESADF
RRQYLNTYTVGFTATNQMLSDAARYGAGKYYQATDSEGLNSALSSALSDITSKAGSGGGG
TSNGATLSSTSSYYQTTYDPKDWRGTIKAFGFTSTGTVNTAAMQWTTDTAIVPGATAPIY
QSWNTATNVPITLAYGNFSPAQQTSLSQGLPTGITGNDLVEWSKGTNKTGLKIRSVLLGD
IINSPLVLASPNDQTASDLVGDTSYSTYLATKATNMSASLVVNGNDGFFSVINSTNGTRR
YAYMPSSVLPSLEMIADPTYINGVSHKFLVDGQVGVFDAQLGSVWKTLALGGTGAGGRAF
YAVQLFDASAGNAIRALWEVSAPAIANTGHPFNDLGYAYARPEVARLADGRWAAFISNGY
GSNSGVAALYVVDIRDGSLIRKIVVNSSETDNGLSSVKLRVNSQNVVQAAYGGDLKGRMW
KFDLSGTSPTAWGLAFAGQPLFTAPGGATQPITAQPLLADNPQGGIQVFFGTGKFNESAD
KLNKDLQGFYSIWDAIGGGGQITVASLQAQSITNIFSGTTGQFVTTSQTDVAYPTKKGWY
LPLVYNNALTGERVINPASLVLGRVVFTTAAVDTTDPCASFGTGKLIEVDAFNGKMLNYA
VLDTNNDGSINTLDTISAGVVFTGGIPTLSAVVSANGATNMVVNDSGGGITDLLTKSVGG
SRRIMWRQIQ
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaatattagggcgctgctgggcgcggtgtggggggcgttgctcagcctttacctg
gcggcgccggtctatggcttcacgccttcggaatcgccactgttgagcgcggcggcggtg
acgcccaacgtgatgctgctgatcgatgactcggggagcatgaataacattatctgggcg
gcggggtttgatccggctgcgacgcaaacgcgcacatttgcatgcaactccagcagcagt
tgcaatgaccgatatgagctggacctggacgattcgaacatcctgttggtgagtcttttg
cggggcggttgctcgtctggctggtacggtttctatcgagccagtatcgggcgcgtctgt
ctgcgactgccagatccagtgggcggtggcaatactcgttacaccgcgaggtacctggcg
tatttggtgaccctggccaacggctccagccgggacttcaccactggcacgattccgaac
gactaccgagtcaacgtggcacgggatgtctcgactgatcttgtcgccaacaaccgcgcc
ctgcgcatcggccttgccactttcaacccgcccaacagtagcaactccggtccaggtggc
tatatcgcccgggccatcagcgacttgtcgccagtcagcggcagtgtcacccagacccag
gccaacgccaattacactgccctgatcaacgccatcaatgccttgggggccgttgccaat
accccgctggccgaaagttactatgaagtcacccgctatttccgaggcatggcgccgttt
tacaacgttacacccagcacctacaccagcccgatccagtatcgatgccagaagaatttc
ggtgtggtcattaccgatggcctgcccacctacgaccgaacgttccccaccaatgacccg
ttgggcggtagtcgtttgccgaactgggatggcatcagcactaacgatggtgccgatcct
gcgggtgacggcgaaggcgacacgctttacctggacgacatcgccaaattcgccttcgac
atcgacatgcgcaccaccggcaccgacgtcaccggaaaaagctgggaatcggccgacttc
cgacgccaatacctcaacacctacaccgtcggattcaccgccaccaaccagatgttgtcc
gacgcggcccgctacggtgcgggcaagtattaccaggccaccgacagcgagggcctgaac
tccgcgttgtcatccgccttgagcgacatcacctccaaggccggctcggggggcggcggc
accagcaatggcgcgacgctgtccagcacctccagttactaccagaccacctacgacccc
aaggattggcgtggcaccatcaaggcgttcggctttacctcgaccggtacggtcaacacg
gcggcgatgcaatggaccaccgacacggccatcgtgcccggcgccacggcgccgatctat
cagtcctggaacaccgccaccaacgtgccgatcacgctggcctacggcaacttctcgccg
gcccagcagaccagcctgagccaaggcttgcccaccggtatcaccggcaacgacctggtg
gagtggagcaagggcaccaacaagacgggcttgaaaatacgcagcgtcttgctcggggac
attatcaactccccgttggtgctggcctcacccaacgaccagaccgcctcggacctggtg
ggcgacaccagctacagcacctacctggcgaccaaggcgacaaacatgagcgccagcctg
gtggtgaacggcaatgacggttttttcagcgtgatcaacagcacgaatggaacccggcgt
tatgcctacatgccgtcgagcgtgctgccttcgctggagatgatcgctgatcccacctat
atcaatggcgtgagccacaagtttttggtggacgggcaggtcggtgtattcgatgcgcaa
ctgggcagcgtctggaaaaccctcgccctgggcggcaccggtgccggtggccgggcgttt
tatgcggtgcaattgttcgatgcgtcggcgggtaacgcgatccgggcactttgggaagtc
agcgctccagccatcgccaacacgggccatcccttcaacgacctgggctacgcctacgca
cgtcctgaagtggcgcgcctggcggacggtcgctgggccgcgttcatttccaacggttat
ggcagcaatagcggcgtggcggcgttgtacgtggtggacattcgcgacggttcgctgatt
cgcaaaatcgtcgtcaacagcagtgaaaccgataacggcctgtcgtcggtcaagctgcgg
gtcaattcccagaacgtggtgcaagccgcctacggcggtgacttgaaagggcggatgtgg
aagttcgacctcagtggcacctccccgaccgcctggggcctggcgtttgctggccagcca
ttgtttaccgcccctggtggggctacccagccgatcactgcgcagcctttgttggcggac
aatccccaaggcggcatccaggtatttttcggcactggcaagttcaacgaatcggccgac
aagctcaacaaggacctgcaagggttctattcgatctgggatgcgatcggcggcgggggg
caaatcaccgtggcgagccttcaggcccaatcgatcaccaatattttttccgggacgacg
gggcagttcgtgaccaccagccagaccgatgtcgcctatcccaccaagaagggctggtac
ttgccgctggtgtacaacaacgccttgaccggggagcgggtcatcaacccagccagcctg
gtgctcgggcgtgtggtcttcacgaccgccgccgttgataccaccgacccgtgcgccagc
ttcggtaccggcaagctgatcgaagtggatgcgttcaacggtaagatgctcaactatgcg
gtgctcgataccaataacgatggttcgatcaataccctcgacacgatttccgctggcgtg
gtgttcacgggcgggatcccgaccttgagtgctgtcgtcagcgccaacggggcaaccaac
atggtcgtgaatgactccggtggaggtatcaccgacctgctgaccaagtccgtcggtggc
agccgtcgtatcatgtggcggcaaatacagtga
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