Pseudomonas alvandae B21-020: LOY40_24895
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Entry
LOY40_24895 CDS
T08625
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas00260
Glycine, serine and threonine metabolism
pcas00460
Cyanoamino acid metabolism
pcas00630
Glyoxylate and dicarboxylate metabolism
pcas00670
One carbon pool by folate
pcas00680
Methane metabolism
pcas01100
Metabolic pathways
pcas01110
Biosynthesis of secondary metabolites
pcas01120
Microbial metabolism in diverse environments
pcas01200
Carbon metabolism
pcas01230
Biosynthesis of amino acids
pcas01240
Biosynthesis of cofactors
pcas04981
Folate transport and metabolism
Module
pcas_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LOY40_24895
09102 Energy metabolism
00680 Methane metabolism
LOY40_24895
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LOY40_24895
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LOY40_24895
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LOY40_24895
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LOY40_24895
Enzymes [BR:
pcas01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LOY40_24895
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
UVM71771
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Position
5530057..5531310
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AA seq
417 aa
AA seq
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MFSRDLTIAKYDADLFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANAAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGIDGNGLIDYDEVERLALEHKPKMIVAGFSAYSQV
LDFPRFREIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANADIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQQQVVKNAKAMAGV
FIERGFDVVSGGTENHLFLLSLIKQEISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactattgccaagtacgacgccgatctctttgccgccatggag
caagaagctcagcgccaggaagagcacattgagctgatcgcttcggaaaactacaccagc
cccgcggtgatggaagctcaaggctcggtactgaccaacaagtacgccgaaggctaccca
ggcaagcgctactacggtggctgcgagtatgtcgatgtggtcgagcaactggccattgac
cgcgccaaggagctgttcggcgccgactacgccaacgtccagccacacgccggttcccaa
gccaacgccgccgtgtacctggcgctgctgtcggccggcgacaccatcctgggcatgagc
ctggcccacggcggtcacctgacccacggcgccagcgtttcctcctccggcaagctgtac
aacgccgtccaatacggtatcgacggcaacggcctgatcgactacgacgaagtcgagcgc
ctggccctcgagcacaagccgaaaatgatcgtggccggtttctccgcctactcccaggtc
ctcgacttcccacgtttccgtgaaatcgccgacaaggtcggtgcctacctgttcgtcgac
atggcccacgttgccggcctcgtcgccgctggcgtgtacccgaacccggtgccgttcgcc
gacgtggtgaccaccaccacccacaagaccctgcgcggtccacgtggcggcctgatcctg
gctcgcgccaacgccgacatcgagaagaagctgaactccgctgtcttcccgggcgcccag
ggtggcccgctggagcacgtgatcgccgccaaggcaatctgcttcaaggaagccctgcaa
cctgagttcaaggcgtaccagcagcaagtcgtcaagaacgccaaggccatggccggtgtg
ttcatcgaacgcggcttcgacgtagtgtccggcggcaccgagaaccacctgttcctgctg
tcgctgatcaagcaggaaatctccggcaaagacgctgacgcagcgctgggcaaagcgttc
atcaccgtcaacaagaactcggtacccaacgatccacgctccccgttcgtcacctcgggc
ctgcgtttcggcaccccggccgtgaccactcgcggcttcaaggaagccgagtgcaaggaa
ctggccggctggatctgcgacatcctggccgacctgaacaacgaagcggtgatcgacgcc
gtgcgtgaaaaggtcaaggccatctgcaagaagctgccggtgtacggcgcttaa
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