Pseudomonas alvandae B21-020: LOY40_25005
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Entry
LOY40_25005 CDS
T08625
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcas03016
]
LOY40_25005 (trmA)
Enzymes [BR:
pcas01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
LOY40_25005 (trmA)
Transfer RNA biogenesis [BR:
pcas03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
LOY40_25005 (trmA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_4
Cons_hypoth95
Methyltransf_11
Methyltransf_12
MTS
RrnaAD
DREV
Methyltransf_15
TRM5-TYW2_MTfase
PrmA
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
UVM71793
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All DBs
Position
5554230..5555309
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AA seq
359 aa
AA seq
DB search
MTFDSQAYAAQLQGKVTRLRDLLAPFEAPEPAVFDSPLGNFRLRAEFRLWREAGERHYAM
FSQDDKRTPILIEEFPIASLRINQLMPQLKAAWQASAPLSHKLFQVEFLTTLAGDAMITL
CYHRPLDEHWHAAASKLATDLGVSIIGRSKGKREVIGHDYVVEKLEVGGRTFSYRQPEGA
FTQPNGTVNQKMLNWAYEALGDRNDDLLELYCGNGNFTLPLATRVRKVLATEISKTSVNA
ALSNLSENAVDNVTLVRLSAEELTEALNEVRPFRRLQGIDLKSYEFGSVFVDPPRAGMDP
DTCELTRRFDNILYISCNPETLAANIAQLNDTHRITRCALFDQFPWTHHMESGVLLTRR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgattcccaagcctacgccgcccagttgcagggcaaggtcacgcgcttgcgt
gaccttctggccccttttgaggcgccggagcctgccgtattcgactcgcccctgggcaac
ttccgcctgcgggccgaatttcgtctgtggcgcgaggctggcgaacggcactacgccatg
ttctcccaggacgacaagcgcacgccgatcctgattgaagagtttcccatcgccagcctg
cgcatcaatcagttgatgccgcagctcaaggccgcctggcaggccagcgcgcccttgagc
cataagttgttccaggtggaattcctcaccacactggccggcgacgcgatgatcaccctg
tgctaccaccgcccgctggatgaacactggcatgccgcggcgtcgaaactggcgaccgac
ctgggcgtcagcatcattggtcgctccaagggcaagcgcgaagtgatcggccacgattac
gtggtggagaagcttgaggtgggcggtcgcaccttcagctatcgccaacccgaaggcgcc
ttcacccagcccaacggcacggtcaaccagaagatgctcaactgggcctatgaagcgctg
ggcgaccgcaatgacgacctgctggagttgtactgcggcaacggcaacttcaccctgccg
ctggcaacccgcgtgcgcaaagtcctcgccaccgaaatcagcaagacctcggtcaacgcc
gcgctgagcaacctcagcgagaacgctgtggataacgtcacgctggtgcgcctgtccgcc
gaagagctgaccgaagccttgaacgaggtccggccgttccgtcgtttgcagggcattgac
ctgaaaagctacgaattcggcagcgtcttcgtcgacccgcctcgcgccggcatggacccg
gacacctgcgagctgacccggcggttcgacaacatcctgtacatctcctgcaaccccgaa
accctcgccgcgaacatcgcgcaactgaacgacacccaccgcatcacgcgttgtgcgttg
ttcgatcaattcccttggacccatcacatggaatccggggtgttgttgacgcggcgctga
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