Pseudomonas alvandae B21-020: LOY40_25085
Help
Entry
LOY40_25085 CDS
T08625
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas03030
DNA replication
pcas03430
Mismatch repair
pcas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOY40_25085
03430 Mismatch repair
LOY40_25085
03440 Homologous recombination
LOY40_25085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcas03032
]
LOY40_25085
03400 DNA repair and recombination proteins [BR:
pcas03400
]
LOY40_25085
Enzymes [BR:
pcas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOY40_25085
DNA replication proteins [BR:
pcas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LOY40_25085
DNA repair and recombination proteins [BR:
pcas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LOY40_25085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Ribosomal_L26
Motif
Other DBs
NCBI-ProteinID:
UVM71809
LinkDB
All DBs
Position
complement(5571796..5572407)
Genome browser
AA seq
203 aa
AA seq
DB search
MERIAVIDFETTGITPSSSCRATEIAVVILEQGRIVDRYQSLMNAGVRVPAFIEQLTGIS
NAMLRSAPPAEKVMNEVNEFVGITPLLAHNAAFDQKFWDFELGRIKRTRLQNFACSLLLA
RRLMPSAPNHKLGTLNAFAGLPHTGQAHRAMADAEMAANLTAHLAAELRQKHGLRELSHD
LLCSLQKVPAAKINEHLKRHRGF
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgcatcgcagtcatcgactttgaaaccaccggcatcaccccgagcagcagttgc
cgggccacggaaatcgccgtggtgatccttgaacaaggccggatcgtcgaccgttaccag
agcctgatgaacgccggtgttcgcgtgccggccttcatcgaacaactgaccgggatcagc
aacgccatgctgcgcagcgctccccctgcggaaaaagtgatgaacgaggtcaacgagttt
gtcggcatcacgccgctgctggcgcataacgccgcgttcgaccagaagttctgggacttc
gaactggggcgcatcaagcgcacccgcctgcagaactttgcctgttcgttgttgctggcc
cggcgcttgatgccatcggcgccgaaccacaaacttggcacgctcaacgcattcgccggc
ctgccccacaccggccaggctcaccgggccatggccgacgccgaaatggccgccaacctt
accgcgcacctcgctgcggaattgcgccagaagcatgggctgcgggagctgtcccacgac
ctgctgtgcagtttgcagaaagtgccagcggcgaagatcaacgaacacctcaagcgccac
cgcggattctga
DBGET
integrated database retrieval system