Pseudomonas alvandae B21-020: LOY40_25160
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Entry
LOY40_25160 CDS
T08625
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcas03009
]
LOY40_25160
Enzymes [BR:
pcas01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
LOY40_25160
Ribosome biogenesis [BR:
pcas03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LOY40_25160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UVM75496
LinkDB
All DBs
Position
complement(5585891..5586457)
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AA seq
188 aa
AA seq
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MAKAPPAEPKLILFNKPFDVLTQFSDGEGRATLKDFIDVPGIYPAGRLDRDSEGLLLLTN
DGQLQARIADPKHKLAKTYWVQVEGEPNDEQLQRLRDGVELNDGMTLPAEARQLDEPQLW
PRNPPVRFRKSVPTSWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGDWTLEGLDQGQ
WKEVPARL
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
gtggccaaggcgcctccggccgagccgaagctgatcctgttcaacaaaccctttgatgtg
ctgacgcaattcagcgacggcgaagggcgggcgacgctcaaggatttcatcgacgttccc
ggcatctacccggccggtcgactggaccgcgacagcgaagggctgctgttgttgaccaat
gacggacaactgcaggcgcgcatcgccgatcccaagcacaagctggccaagacgtactgg
gtgcaagtcgagggcgagccgaacgacgaacagctgcagcgcctgcgcgatggcgtggag
ttgaacgatggcatgacgctgcctgccgaggcccgtcaactggacgaaccgcaattgtgg
ccgcgcaacccgccggtgcgctttcgcaaaagtgtgccgacgagctggctggagctggtc
atacgcgaaggacgcaaccgccaggtacgacgcatgaccgccgcggtaggcttgccgacc
ttgcgcctggtgcgtgtcaggattggcgactggacgctcgaagggctcgaccagggccag
tggaaggaagtgccggcgcgcttataa
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integrated database retrieval system
