Pseudomonas alvandae B21-020: LOY40_25290
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Entry
LOY40_25290 CDS
T08625
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcas01011
]
LOY40_25290
Enzymes [BR:
pcas01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LOY40_25290
Peptidoglycan biosynthesis and degradation proteins [BR:
pcas01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LOY40_25290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
UVM71848
LinkDB
All DBs
Position
complement(5615604..5616629)
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AA seq
341 aa
AA seq
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MRAMPTYQPLKARPLKLVALAALSLLVVSCSTSRAPTQKNSNVVKATPGLDINRAHKDGA
PWWDVDVSRIPDATPTLHTGPYKANPYTVLGKTYFPMADSKRYVASGTASWYGTKFHGQN
TANGEVYDLYGMSAAHKTLPLPSYVRVTNLDNNKSVILRVNDRGPFYSDRIIDLSYAAAK
KLGYAEIGTARVKVEGIDPQEWWAQRGRPAPLMLNEPKVAQNAAPTVTASTGTVEQWTPP
PQQHAAAVVPVQIDPKKNASATASGQYLQVGAFANPDAAELLRSKLSSMVSAPVFISSIV
RNQQTLHRVRLGPIGSPGEVQQVQNSVRLANLGSPSLVTAE
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcaatgcctacctatcaacccctgaaagccaggcccctcaagctggtggcattg
gctgcgctgtcgctgttggtcgtcagttgttcaaccagccgcgcaccgacccagaagaac
agcaacgtcgtgaaagccacgccgggcctggacatcaaccgggcccacaaggacggcgcg
ccgtggtgggacgtggatgtctcgcgcatccccgacgcaacgccgaccctgcacaccggc
ccctacaaggccaacccgtatacggtgctgggcaagacctatttcccaatggctgattcc
aagcgctatgtggcctcgggcacggcgtcctggtacggcaccaagttccatggccagaac
accgccaatggcgaggtctacgacctttatggcatgagcgctgcccacaagaccttgccg
ctgcccagctatgtgcgggtgaccaacctggacaacaacaagagcgtgatcctgcgggtc
aacgaccgtgggccgttctattccgaccggatcatcgacttgtcgtatgcggcggcgaaa
aagctcggttacgctgaaatcggcactgcgcgggtcaaggtcgaaggcattgatccgcag
gaatggtgggcccagcgcggccgtccggcgcctttgatgctcaacgagccgaaagtggcg
caaaatgccgcgccgaccgtgacggcttccaccggtacggtcgagcaatggaccccaccg
ccgcagcaacatgcggcggccgtagtgcccgtgcagatcgacccaaaaaaaaacgcttct
gcaacagcgtctggccagtatctgcaagtgggcgcgttcgccaacccggacgctgccgag
ctgttgaggtcgaagctgagctcgatggtcagcgcgccggtgttcatcagctcgatcgtg
cgcaaccagcagacactgcatcgggtgcgcctggggccgatcggttctccgggtgaggtc
cagcaggtgcagaacagtgtgcgcctggccaatctcggttcgccgagcctggtcacggct
gagtag
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