Pseudomonas canavaninivorans: LOY40_25305
Help
Entry
LOY40_25305 CDS
T08625
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pcas
Pseudomonas canavaninivorans
Pathway
pcas00550
Peptidoglycan biosynthesis
pcas01100
Metabolic pathways
pcas01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LOY40_25305 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LOY40_25305 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcas01011
]
LOY40_25305 (mrdA)
Enzymes [BR:
pcas01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LOY40_25305 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pcas01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LOY40_25305 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UVM71850
LinkDB
All DBs
Position
complement(5618792..5620687)
Genome browser
AA seq
631 aa
AA seq
DB search
MPQPIRIKDHEKDARLVRGRVVFGAITVVTLIGVLIARLYFLQVIQYEYHSTLSESNRVH
VQPIPPTRGLIFDRNGVVVADNRPSFSLSMTRERSGDWQKVLDVIVEVLQLTPEDRVIFE
KRMRQGRRPFEPVPIMFELTEEQIALIAVNQFRLPGVEVVAQLVRHYPQGPHFAHSVGYM
GRINEKELKTLDPVNYSGTHHIGKTGIERFYEAELHGQVGYEEVETNARGRVLRVLKRTD
PIPGKDIVLSLDIKLQEAAEAALGGRRGAVVALDPNTGEVLAMVSQPSFDPNLFVTGISF
RAYAELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDSGVVTASTRVYDPGYYMLPNY
DHKYRNWNRTGDGYVDLETAIMRSNDTYFYDLAHKLGIDRLSSYMNKFGIGQKVSLDMFE
ESPGLMPSREWKRATRRQAWFPGETLILGIGQGYMQATPLQLAQATALVASKGKWYRPHL
AKTIEGEKPVDPDPMPDIILRNPSDWQKVNNGMQQVMHGARGTARKAAIGSPYRIAGKSG
TAQVVAIKQGEKYDRSKVQERHRDHALFVGFAPADNPKIVVSVMVENGESGSGVAAPVVR
QVMDAWLLDEHGQLKPEFASPISAEATAREE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgccccagccgatccgcatcaaggaccacgaaaaagacgcccgcctggtgcggggccgc
gtcgtgttcggcgccattaccgtggtgacgctgatcggcgtgctgattgcgcggttgtat
tttctccaggtcatccagtacgagtaccactcgacgctgtcggaaagtaaccgggtgcat
gtgcaacccattccgccgacccgtgggctgatcttcgaccgcaacggcgtggtggtggcg
gacaaccggcccagcttcagcctgagcatgacccgcgaacgttccggcgactggcagaaa
gtcctcgacgtgatcgtcgaagtgctgcaactgacgcccgaggaccgggtcatcttcgag
aaacgcatgcgtcagggccggcgccccttcgagccggtgccgatcatgttcgagctgacc
gaagagcagatcgccctgatcgccgtgaaccagttccgcctgcccggcgtggaagtggtg
gcgcaactggtgcggcattacccccaagggccgcatttcgcccactcggtcggctacatg
ggccggatcaacgaaaaagagctcaagaccctcgacccggtcaactacagcggcacccac
catatcggcaagaccggcatcgagcgattctacgaggccgagctgcacggccaggtgggt
tacgaggaagtcgagaccaacgcccggggccgggtgctgcgggtgctcaagcgtaccgac
ccgattcccggcaaggacatcgtcctgagcctggacatcaagttgcaggaagccgccgag
gcggcgctgggcgggcggcgtggtgccgtggttgcgctggacccgaacaccggcgaggtc
ctggcgatggtcagccagccgagcttcgacccgaacctgttcgtcaccggcatcagtttc
agggcctatgccgagctgcgcgattccatcgatcggccgttgttcaaccgcgtgctgcgc
gggctctacccgccgggttcgaccatcaagccggccgtggcgattgccgggctggactcc
ggcgtggtgaccgcgtcgacccgggtctacgatccgggctactacatgctgcccaactac
gaccacaagtatcgcaactggaaccgcaccggcgacggctacgtagacctggaaacagcg
atcatgcgttccaacgacacctatttctatgacctggcccacaagctggggatcgatcgg
ttgtcgtcctacatgaacaagttcggcatcggtcagaaagtctccctggacatgttcgaa
gaatccccaggcctgatgccgtcccgcgagtggaaacgggcgacgcgccgccaggcctgg
ttccccggcgaaaccctgatcctcgggatcggccagggctacatgcaggcaacgccgctg
caattggcccaggccacggcattggtggcgagcaagggcaagtggtatcgcccgcacttg
gccaagaccatcgaaggcgagaagccggtggacccggacccgatgccggacatcatcctg
cgcaacccgtcggactggcagaaggtcaacaacggcatgcagcaggtcatgcacggcgcc
cggggtaccgcgcgcaaggcggccatcggctcgccctaccggattgccggcaagagcggt
accgcccaggtggtggcgatcaagcagggcgagaagtacgaccgctccaaggtccaggag
cgccatcgcgaccacgccttgttcgtcggtttcgcaccggccgacaacccgaagatcgtc
gtctcggtgatggtcgagaacggtgagtccggttccggcgtcgccgccccggtggtgcgc
caggtcatggacgcctggctgctggacgagcacggccagctcaagcccgaattcgcaagc
cccatcagcgcggaggctacggcccgtgaagaataa
DBGET
integrated database retrieval system
