Pseudomonas alvandae B21-020: LOY40_25670
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Entry
LOY40_25670 CDS
T08625
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas00900
Terpenoid backbone biosynthesis
pcas01100
Metabolic pathways
pcas01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LOY40_25670 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pcas01006
]
LOY40_25670 (ispA)
Enzymes [BR:
pcas01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
LOY40_25670 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
LOY40_25670 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
LOY40_25670 (ispA)
Prenyltransferases [BR:
pcas01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
LOY40_25670 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
UVM71921
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All DBs
Position
5698796..5699683
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AA seq
295 aa
AA seq
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MIGAYQASSQARVNTALDTLFSAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGG
QAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLA
FSALLDPTLSDCPAQVRLDMVSALALAAGPAGMVGGQAIDLGSVGLKLDQDALEYMHRHK
TGALIEASVKLGALASGRATPAQLQALQTYARAIGLAFQVQDDILDVESDTQTLGKRQGA
DIARDKPTYPALLGLDAAKAYALELRDQALAALRPFDAAAEPLRDLARYIVERRS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcgcgtatcaggccagcagccaggcccgggtcaatactgcactggataccttg
ttcagcgccccgagcccggaactggcgcggctgtacgaagccatgcgctacagcgtgatg
aacggcggcaagcgggtacgtccgctgctggcctatgccgcgtgcgaagccctgggcggc
caggccgaacaagccaacggcgcggcttgcgcggttgagctgattcacgcctattccctg
gtgcatgacgacctgccggccatggacgatgacgacctgcgtcgcggccagccaacgact
cacaaaaaattcgacgaagcctgcgcgatcctggccggtgatggcctgcagagcctggcc
ttcagtgcgctgctggacccgaccctgagcgattgcccggcgcaggttcgcctggacatg
gtcagcgccctggcattggcggcaggccctgccggaatggtcggaggccaagccatcgac
ctcggttcggtgggcttgaagctcgatcaggacgcattggaatacatgcaccggcacaag
accggcgcgctgatcgaagccagcgtcaagctcggcgccctggccagcggccgggccacg
cccgcacagctgcaggccttgcagacctacgcccgagccatcggcctggcgttccaggtg
caggacgacatcctcgacgtcgaaagcgatacccagaccctgggcaagcgccaaggcgcc
gacatcgcgcgggacaagccaacctacccggccctgctcggcctcgatgccgccaaggcc
tacgccctggaactgcgcgaccaggccctggccgcgctgcgaccctttgacgcggcggcc
gaaccgttgcgcgatctggcgcgttatatcgtcgaacgacgcagctga
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