Pseudomonas alvandae B21-020: LOY40_26220
Help
Entry
LOY40_26220 CDS
T08625
Symbol
crp
Name
(GenBank) cAMP-activated global transcriptional regulator CRP
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas02020
Two-component system
pcas02024
Quorum sensing
pcas02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LOY40_26220 (crp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LOY40_26220 (crp)
02025 Biofilm formation - Pseudomonas aeruginosa
LOY40_26220 (crp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcas03000
]
LOY40_26220 (crp)
Transcription factors [BR:
pcas03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
LOY40_26220 (crp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
MarR
TrmB
MarR_2
HTH_11
HTH_28
Motif
Other DBs
NCBI-ProteinID:
UVM72022
LinkDB
All DBs
Position
5801403..5802047
Genome browser
AA seq
214 aa
AA seq
DB search
MVAITPTSKIKNLDKLLMHCQRRRYPAKHNIICAGDRSDTLFFIIKGSVTILIEDDEGRE
MIIAYLNSGDFFGELGLFEQAGKEQERSAWVRAKVECEVAEIGYSKFRELSQQDPDILFV
LSGQIAQRLRNTTRKVGDLAFFDVTGRVARCLLDLCKQPDAMTHPDGMQIKVTRQEIGRI
VGCSREMVGRVLKDLEERNLVSVKGKTMVVFGTR
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggttgccattactcccacgtccaagatcaagaatctcgacaagctcttgatgcattgc
cagcgtcgccgctaccccgccaagcacaacatcatttgtgcgggggaccgttccgacacg
ctgttcttcatcatcaagggatcagtcactatcctgatcgaggacgatgaaggacgggag
atgatcatcgcctacctcaattcgggggacttcttcggcgaattgggtttgttcgaacag
gccggcaaggagcaagagcgcagcgcttgggtgcgggcgaaagtcgaatgcgaagtcgca
gaaatcggctacagcaaatttcgggagctgtcgcagcaggatccggacatccttttcgtc
ctcagcggacaaatcgcacagcgcctgcgcaacaccacgcgcaaggtaggtgacctcgcc
ttcttcgacgtaaccggtcgtgtcgcccgttgccttttggacctgtgcaagcagcccgac
gccatgacccaccccgacgggatgcagatcaaagtgacgcgtcaggaaatcggccgcatt
gtcggctgctcccgcgagatggttggacgtgtgctcaaggacctggaagaacgcaacctg
gtcagcgtcaaaggcaagacgatggtggtcttcggcacccgctag
DBGET
integrated database retrieval system
