Pseudomonas alvandae B21-020: LOY40_26265
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Entry
LOY40_26265 CDS
T08625
Name
(GenBank) ABC transporter permease
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LOY40_26265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcas02000
]
LOY40_26265
Transporters [BR:
pcas02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LOY40_26265
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Paralog
GFIT
Motif
Pfam:
BPD_transp_1
TraG_N
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Motif
Other DBs
NCBI-ProteinID:
UVM72031
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Position
complement(5809778..5810602)
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AA seq
274 aa
AA seq
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MLSPYMSPVERVWFYSLRILCGLVLLFLILPVLVIIPLSFNSGSFLVYPLQGFSLQWYHD
FFASAEWMRALKNSIIVAPAATLLAMIFGTLAAIGLTRGDFPGKALVMALVISPMVVPVV
IIGVASYLFFAPLGMGNSFFSLIIVHAVLGVPFVIITVSATLQGFNHNLVRAAASLGASP
LTAFRRVTLPLIAPGVISGALFAFATSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPT
IAAAATLLIAFSVILLLTLEWLRGRSEKLRTSQV
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgctgagtccttacatgtcccccgtcgaacgggtgtggttctacagcttgcgcatactt
tgcgggctggtcctgttgttcctgatcctgccggtgctggtgatcattccgttgtcgttc
aactccggcagcttcctggtctatccgctgcagggcttttcgttgcagtggtatcacgac
ttcttcgcttcggcggagtggatgcgggccttgaagaacagcatcatcgttgccccggcg
gctacattgctggcgatgatcttcggtacgctggcggccattggcctgactcgcggcgat
ttcccgggcaaggcgctggtgatggcactggtgatttccccgatggtggtaccggtggtg
atcatcggcgtggcgagctacctgtttttcgcaccgctgggcatgggtaacagcttcttc
tccttgatcatcgtccacgccgtgctgggcgtaccgttcgtcatcatcacggtctcggcg
acgctgcagggtttcaaccacaacctcgtccgggcagctgcaagtctcggggcgtcgcca
ttgacggcgtttcgtcgggtgaccctgccgttgatcgccccaggcgtgatctctggagcg
ctgttcgccttcgcgacgtcgtttgacgaggtggtcgtaaccctgttcctggccggcccc
gagcaggcaacgttgccacggcagatgttcagcggtatccgcgaaaacctcagccccacc
atcgcggcggcggcgacgttgctgattgccttctcggtgatcctgctgctgaccctggag
tggttgcgtgggcgtagcgagaagctgcggaccagccaggtctga
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