Pseudomonas alvandae B21-020: LOY40_26315
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Entry
LOY40_26315 CDS
T08625
Name
(GenBank) LPS-assembly protein LptD
KO
K04744
LPS-assembly protein
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcas02000
]
LOY40_26315
Transporters [BR:
pcas02000
]
Other transporters
Pores ion channels [TC:
1
]
LOY40_26315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_N
OstA_2
LptC
Motif
Other DBs
NCBI-ProteinID:
UVM72040
LinkDB
All DBs
Position
5821572..5824370
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AA seq
932 aa
AA seq
DB search
MALKSPAFRKKFPLLVTGSLLALQPLASSFVVAAQQYDCSVSASGAWDCSPKTPAAALPP
RPVHEGSAVADSGSAPAESGSGEEAGEKPMLVTEAKGRGLKSRSADYSHLDWVPRENLTP
AQLAETGPYCAGAYIEPTRPGMNDKTAKSDAPTFLGAKASRYEQEQQVATLAGDVVMRQG
SMQVEADEASLYQAENRGELNGNVRVRDNGALIVGDHADVQLDTGEAKVDNAEYVMHKSR
IRGNALYAKRAENAIIRLKDGTYTTCEPNSNAWTLKGNNITLNPATGFGTATNVTLRVKD
IPVLYTPYIYFPIDDRRQSGFLPPTIGSGSDTGLLLVTPYYFNLAPNYDATLYPRYMGKR
GMLMEGEFRYLTKSSEGQFGAAYLNDEDDERSGQTDYDKTRYMYNWQHKGGLDSRVLTEV
DYTKISDPYYFQDLQTDQIGVESRDYVNQQGAVSYRGDNYTARLNAQAYQMATISKVTPY
NRLPQITFNGSLPEHPYGLDFAYKTELVRFDRDLRTGNYTDEDGNTEPFLDNNIRGLARA
NGDRLNLAPVMSLPMTASYGYIKPSLKYQYTQYDLDLDSRGKSQVAAQNAEADRLRGTYS
SSQSRGVPIASIDSGLYFDRDTQWFGTNYRQTLEPRLFYLYVPEKDQSDIPVFDTSESTF
SYSSLFRDNRFTGSDRVGDENKLSLGVTSRWIEENGFERQRVSVGQALYFKDREVQLPGI
DFKTREDAKSDVSPYALEYEYRWNRDWRTTATYNWDPDTHSPRSGSAMFHYQPEDNPNKV
INAGYRYRNDQVRYDEATGQWQVGGGDYGTPGTPGYVKDYYKIKQHDFSVIWPIVPQWNA
ISRWQYDYNRNRTLEAFGGFEYDNCCWKLRLINRYWVDYEEFSQAAPENEKGDHGVFLQI
VLKGLGGLTGAKVESFLDKGIQGYREREDQAF
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcattgaaatcccccgcgtttcgtaaaaaatttccgttgctggtcaccggcagtctg
ctggccctgcaacctttggcctcttcattcgtcgtcgcggcgcagcagtatgactgctcc
gtctccgcttcgggtgcctgggactgttcacccaagacgccggccgctgcattgccgccg
cgccccgtgcatgaaggcagcgcagtagccgatagcggcagcgccccggccgaaagcggt
tctggcgaagaagccggtgaaaagccgatgctggtcaccgaagccaagggccgtggcctg
aagtcgcgcagtgcagactacagtcacctggactgggttccgcgcgagaacctcacgccc
gctcaactggctgaaaccggtccctactgcgctggcgcgtatatcgaaccgacgcgtcct
ggcatgaacgacaagacggccaaaagcgacgccccgaccttcctgggcgccaaggcctcg
cgctacgagcaggagcagcaggtagcgaccctggccggtgacgtggtcatgcgccagggc
agcatgcaggtcgaagccgacgaggccagcctgtaccaggccgagaaccgtggcgagctg
aatggcaacgtacgggttcgcgacaacggtgcgctgatcgtcggcgaccacgccgatgtg
cagctggacaccggcgaagccaaggtcgacaacgccgaatacgtgatgcacaagtcgcgc
atccgcggtaatgcgctttatgccaagcgcgccgagaacgcgatcatccgtctcaaggac
ggtacgtacaccacgtgcgaaccgaacagcaacgcctggacactcaagggcaacaacatc
accttgaacccggccaccggtttcggtactgcaaccaacgtgacattgcgggtcaaggac
attccggtcctgtacacgccgtacatctatttcccgatcgacgaccgtcgccagtccggc
ttcctgccgccgaccattggcagcggcagcgataccggcttactgctggtcaccccgtac
tatttcaacctggcgccaaactacgacgccacgttgtacccacgctacatgggcaagcgc
ggaatgttgatggaaggcgaattccgttacctgaccaaatccagtgaaggtcagttcggc
gccgcgtacctcaacgatgaagacgatgagcgtagcgggcagaccgactacgacaagacc
cgctacatgtacaactggcagcacaagggcggcctcgattcgcgcgtgctgacggaagtc
gactacaccaagatcagcgatccgtactacttccaggatctccagaccgaccagatcggc
gtggaatcgcgggactatgtgaaccagcaaggtgccgtcagctatcgcggtgacaactac
accgcgcggttgaatgcccaggcttaccagatggcgacgatttcgaaggtcacgccttat
aatcgcctgcctcagatcactttcaacggctctctgcccgaacatccgtatggtctggat
ttcgcgtacaagaccgagctggtgcggtttgatcgtgatttgcggaccggtaactacacc
gacgaagacggaaatactgagccgttcctcgacaacaacatccgcggcttggccagggct
aacggcgatcgcctgaacctggcccctgtgatgagcctgccgatgaccgcaagctacggc
tatatcaagccgtcgctcaaataccagtacacccaatatgatctggacctggacagcagg
ggcaaatcgcaggtcgcggcgcagaacgccgaagccgatcgcctgcgcggcacctacagc
agtagccagagccgtggcgttccaatcgccagcatcgacagcggcctgtatttcgaccgc
gacacccaatggttcggcaccaactaccgccagaccctggagccacgcctgttctatctc
tatgtaccagagaaggaccagagcgatatcccggtgttcgataccagcgaatcgaccttc
agctattcctcgctgttccgggataaccgcttcactggctccgaccgtgtcggcgacgag
aacaagctgtccctgggcgtgaccagccgctggatcgaagaaaacggtttcgagcgtcaa
cgcgtcagcgttggccaggccttgtacttcaaggatcgcgaagtccaactgccaggcatc
gacttcaagactcgcgaagacgccaagtccgacgtttccccgtacgccttggaatacgaa
tatcgctggaaccgcgattggcgcaccacggcgacctacaactgggatccggatactcac
agccctcgttcgggcagtgcgatgttccactaccagccggaagacaacccgaacaaagtc
atcaacgccggttatcgctatcgcaacgaccaggtccgctacgacgaggccacaggtcaa
tggcaagtgggcggtggcgactacggcaccccgggtacacccggttacgtgaaggactac
tacaagatcaagcagcacgacttctcggtcatctggccgatcgtgccgcagtggaacgcc
atcagccgctggcagtatgactacaaccgcaaccgtaccctggaagcctttggtggtttc
gaatacgacaactgctgctggaaactgcgcctgatcaaccgttactgggtcgactatgaa
gagttcagtcaagccgccccggaaaacgaaaaaggcgaccacggcgtcttcctccaaatt
gttctgaagggactcggcggcctcaccggcgccaaggtagagagtttcctcgacaaaggc
attcaaggttatcgtgaacgtgaagaccaagctttctga
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