KEGG   Pseudomonas alvandae B21-020: LOY40_26670
Entry
LOY40_26670       CDS       T08625                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pcas  Pseudomonas alvandae B21-020
Pathway
pcas03030  DNA replication
pcas03430  Mismatch repair
pcas03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pcas00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LOY40_26670
   03430 Mismatch repair
    LOY40_26670
   03440 Homologous recombination
    LOY40_26670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcas03032]
    LOY40_26670
   03400 DNA repair and recombination proteins [BR:pcas03400]
    LOY40_26670
Enzymes [BR:pcas01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LOY40_26670
DNA replication proteins [BR:pcas03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LOY40_26670
DNA repair and recombination proteins [BR:pcas03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LOY40_26670
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DUF7833
Other DBs
NCBI-ProteinID: UVM72108
LinkDB
Position
5904532..5905239
AA seq 235 aa
MSLFSWLRPVQPTLGDALQQRLANLPAPAPLAECTLRKQRWVVVDLETTGLNLNKDQVLS
IGAVVIEDGAIDFSQQFERTLQCDKQKLGPSVLIHGLAPSAIAAGSDPAEALLAFMEFVG
DSPLLAFHAPFDSHMLGRATKDYLGYRLQHPFLDVADLAPMLCPQANLRKSGLDEWIDWF
KLQVFERHNASADALATAELALILFSRAGQQDIHSPLALQQRLGQWKRRQQAPSL
NT seq 708 nt   +upstreamnt  +downstreamnt
gtgagcctgttttcctggctgcgcccggtccagccaacgcttggcgacgccttgcagcaa
cgcctggccaacctgcccgcccccgccccattggctgaatgcaccttgcggaaacagcgt
tgggtggtggtcgacctggaaaccaccggccttaacctgaacaaagaccaggtgttgtcc
atcggcgccgtggtgatcgaagacggtgccatcgacttcagccagcaattcgagcggacc
ttgcaatgcgacaagcagaagctcgggccaagcgtgctgatccacggcctggcgccgagt
gccatcgccgctggcagcgacccggccgaagccctgctggcgttcatggaattcgtcggc
gacagtccgctgctggcgtttcatgcgccattcgattcccacatgctcgggcgcgccacg
aaagattacctgggctaccgactccagcatcccttcctggacgtggccgacctggcgccg
atgctttgcccgcaagccaacctgcgcaagtccggcctggacgaatggatcgactggttc
aagctgcaagtcttcgaacgccacaatgccagcgccgacgccttggccacggcggagctg
gctttgatcctgttcagtcgcgctggtcaacaggacatccacagccccctcgccctgcaa
cagcgcctgggacaatggaagcggcggcagcaggcgccttcgctttaa

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