Pseudomonas alvandae B21-020: LOY40_26780
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Entry
LOY40_26780 CDS
T08625
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas00260
Glycine, serine and threonine metabolism
pcas00460
Cyanoamino acid metabolism
pcas00630
Glyoxylate and dicarboxylate metabolism
pcas00670
One carbon pool by folate
pcas00680
Methane metabolism
pcas01100
Metabolic pathways
pcas01110
Biosynthesis of secondary metabolites
pcas01120
Microbial metabolism in diverse environments
pcas01200
Carbon metabolism
pcas01230
Biosynthesis of amino acids
pcas01240
Biosynthesis of cofactors
pcas04981
Folate transport and metabolism
Module
pcas_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LOY40_26780
09102 Energy metabolism
00680 Methane metabolism
LOY40_26780
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LOY40_26780
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LOY40_26780
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LOY40_26780
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LOY40_26780
Enzymes [BR:
pcas01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LOY40_26780
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
UVM72130
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Position
complement(5929631..5930884)
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AA seq
417 aa
AA seq
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MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTTTGLIDYDEVERLAVECKPKMIVAGFSAYSK
TLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKANEEIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEAAEPGFKAYQQQVIDNAQAMAG
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVTQCVTLAGWICDILDNLGDADVEANVAQQVAALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccaaatccaaggctacgatgatgcactgctggcggcgatgaat
gccgaggagcaacgccaggaagatcacatcgaactgatcgcgtcggagaactacaccagc
aagcgtgtgatgcaggcccagggcagcggcttgaccaacaaatacgccgaaggctatccg
ggcaagcgctactacggtggctgcgagcacgtcgacaaggtcgaggccctggccatcgag
cgcgccaagcaattgttcggcgccgattacgcgaacgtccagccgcactccggttcgtcg
gccaacagcgccgtctacctggccttgctgcaagccggcgacaccatcctgggcatgagc
ctggcccacggcggtcacttgacccacggtgccaaagtgtcgtcctcgggcaagctctac
aacgcggtgcaatacggcatcgacaccaccaccggcctgatcgactacgacgaagtcgag
cgcctggcggtcgagtgcaagccgaagatgatcgtcgccggtttctccgcctactccaag
accctggatttcccacgcttccgccagatcgccgacaaggtcggtgccttgttgttcgtc
gatatggcccacgtcgctggcctggttgccgccggcctgtacccgaacccgctgccgtac
gccgacgtggtgaccactaccactcacaagaccctgcgcggtccacgtggcggcctgatc
ctggccaaggccaacgaagaaatcgagaagaagctcaacgccgcggtattccccggcgcc
cagggcggcccgctgatgcacgtgatcgccggcaaggcggtgtgcttcaaggaagcggcg
gagcctggcttcaaggcgtaccagcagcaagtgatcgataacgcccaggccatggctggc
gtgttcatcaagcgcggctacgatgtagtgtccggcggcaccgacaaccatctgttcctg
gtcagcctgattcgccaaggcctgaccggcaaggacgccgacgccgccctgggccgtgcc
cacatcaccgtcaacaagaatgccgtgccgaacgacccgcaatcgccgttcgtgacctcg
ggcctgcgcatcggcaccccggcggtgaccacgcgtggtttcaaggttacccagtgcgtc
acgctggccggctggatctgcgacatcctcgacaacctcggcgacgccgatgtcgaagcc
aatgtcgcgcagcaagtggcggccctgtgcgcggacttcccggtttatcgctga
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