Pseudomonas alvandae B21-020: LOY40_26830
Help
Entry
LOY40_26830 CDS
T08625
Symbol
dgcB
Name
(GenBank) dimethylglycine demethylation protein DgcB
KO
K21834
N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas00260
Glycine, serine and threonine metabolism
pcas01100
Metabolic pathways
Module
pcas_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LOY40_26830 (dgcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3483
CCG
Fer4_8
Fer4_10
Fer4_9
Fer4_17
Fer4_16
Fer4_6
Fer4_2
Fer4
Fer4_4
Fer4_7
Fer4_21
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
UVM72140
LinkDB
All DBs
Position
complement(5946083..5948032)
Genome browser
AA seq
649 aa
AA seq
DB search
MLNTLLPILLFAALGLAALGALRRVNMWRRGRPSKVDLIGGLFAMPKRYMVDLHHVVARD
KYIANTHVATAGGAVASIVLAILVHGFGLHNRILGYALLLMSAVMFVGAIFMYLRRRNPP
ARLSKGPWMRLPKSLLAFSASFFLVTLPVAGILPENFGGWLVAAILGVGVLWGVSELFFG
MTWGGPMKHAFAGALHLAWHRRAERFGGGRSTGLKPLDLNDPSAPLGVEKPKDFTWNQLL
GFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPGKPVGEHSG
NPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEKGATPNKGAEV
LENLIATDNPGGFAPGGRMNWAADLNLNLLSEKKSTDVLFWVGDGAFDMRNQRTLRAFVK
VLKAAKIDFAVLGLEERDSGDVARRLGDEATFQLLAKRNIQTLAKYSFNRIVTCDPHSFH
VLKNEYGAFDGNYLVQHHSTYLAEIIDAGALNLGQHKGDSVTYHDPCYLGRYNGEYEAPR
QVLRALGIEVKEMQRSGFRSRCCGGGGGAPITDIPGKQRIPDMRMDDIRETGAELVAVGC
PQCTAMLEGVVEPRPMIKDIAELVADALLEDAAPNKPVAPAKREPAEVH
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacacccttcttccaatcctgctgttcgcagccctgggcctcgcggccctcggc
gccctgcggcgggtgaacatgtggcgccggggacgaccgtcgaaagtcgatctgatcggc
ggtctctttgccatgcccaagcgctacatggtggatctgcaccacgtggtggcgcgggac
aagtacattgccaatacccacgtcgccacggcgggtggtgcggtggcatcgattgtgttg
gcgatcctcgtccacggttttggcctgcacaaccgcatcctcggctacgccttgctgctg
atgtcggcggtgatgttcgtgggtgcaatcttcatgtacctgcggcggcgcaacccgcca
gcgcgtttgtcgaaaggcccgtggatgcgcctgccgaaaagcctgctggccttctcggcg
tcgttcttcctggtgaccctgccggtggcgggcatccttccggaaaacttcggtggctgg
ctggtggcggcaatcctgggtgtcggcgtgttgtggggcgtgtcggagctgttcttcggc
atgacctggggcggaccgatgaagcacgccttcgccggtgccttgcacctggcctggcac
cggcgcgccgagcgctttggtggcggccgttccaccggtctgaagccgctggacctgaat
gatccgtccgcaccgctgggtgtggaaaaacccaaggatttcacctggaaccaactgctc
ggcttcgatgcctgtgtgcagtgcggcaagtgcgaagcggcctgcccggcgttcgccgcc
ggccagccgctgaacccgaaaaaactcatccaggacatggtcgtcggcctggccggcggc
accgatgcgaaattcgccggtagcccttacccgggcaaacccgtgggcgagcacagtggc
aacccgcaccagcccatcgtcaacggcctggtggatgccgagaccctttggtcctgcacc
acctgccgggcgtgcgtcgaggaatgcccgatgatgatcgagcacgtcgatgcaatcgtc
gacatgcgccgccacctgaccctggaaaaaggcgcgacgccgaacaagggcgccgaggtg
ctggaaaacctcatcgccaccgacaaccctggcggcttcgccccgggcgggcggatgaac
tgggcggcggacttgaacctgaacctgctcagcgagaagaaatccaccgacgtgctgttc
tgggtcggcgacggcgctttcgacatgcgcaaccagcgcaccctgcgggcgttcgtgaaa
gtgctcaaggcagcgaaaatcgactttgccgtgctcggcctcgaagaacgcgacagcggc
gacgtggcccggcgcctgggcgatgaagcgacgttccagctgttggccaagcgcaacatc
cagaccctggcaaaatacagcttcaaccgcatcgtcacttgcgacccccacagcttccat
gtgctgaaaaacgaatacggcgccttcgacggcaactacctggtgcagcaccacagcacc
tacctggcggaaatcatcgacgccggggcgctgaacctcggccagcacaagggcgacagc
gtgacctatcacgacccgtgctacctgggccgctataacggtgagtacgaggcgccgcgc
caagtgctgcgtgcgctgggcatcgaggtcaaggaaatgcagcgttccggtttccgttcg
cgttgctgcggcggtggcggcggcgcgccgatcacggacatcccgggcaagcagcgcatc
ccggacatgcgcatggacgacatccgcgaaaccggcgccgagctggtggccgtgggttgt
ccacagtgcaccgcgatgctcgaaggcgtggtcgaaccacggccgatgatcaaggacatt
gccgaactggtggccgacgcgctgcttgaagacgcggccccgaacaagcctgtggcgccg
gccaaacgtgaacccgcggaggtgcattaa
DBGET
integrated database retrieval system
