Pseudomonas alvandae B21-020: LOY40_26965
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Entry
LOY40_26965 CDS
T08625
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcas03009
]
LOY40_26965 (dbpA)
Enzymes [BR:
pcas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LOY40_26965 (dbpA)
Ribosome biogenesis [BR:
pcas03009
]
Prokaryotic type
rRNA helicases
LOY40_26965 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
PRAI
Motif
Other DBs
NCBI-ProteinID:
UVM75507
LinkDB
All DBs
Position
5978234..5979571
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AA seq
445 aa
AA seq
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MLANLESLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAFGIGLLNPINPRYFGCQ
ALVMCPTRELADQVAKEIRRLARAEDNIKVLTLCGGVSFGPQIASLEHGAHIIVGTPGRI
QQHLRKGSLVLDGLNTLILDEADRMLDMGFYDAIEDIIQQTPERRQTLLFSATYPVGIKQ
LASKFMRDPQQVKAEAFHSDAQIEQRFYEISPEERMDAVVKVLAHFRPASCVAFCFTKQQ
VQETVDHLTSKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVATDVAARGLDIDALDMV
INVELARDSEIHIHRVGRTGRAGEKGIAISLVAPSEAHRAQAIEQLQKSPLSWDQLDNLK
PQGGGPLLPAMSTLCIGAGRKDKVRPGDILGALTGEAGIPGAQVGKIAIFDFQAYVAVER
GIAKQALQRLNDGKIKGRSLRVRIL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgctggctaacctcgaatcactcggttatgcccagatgacgccgatccaggcgcaaagc
ttgccggtgatcctcaagggcatggacttgatcgcccaggccaagaccggcagcggtaag
actgccgccttcggcatcggcctgctgaacccgatcaacccgcgctatttcggctgccag
gccctggtgatgtgcccaacccgcgagctggccgaccaggttgccaaggaaatccgccgc
ctggcccgcgccgaagacaacatcaaggtcctgaccctgtgcggcggcgtgtcgttcggc
ccgcagatcgcctccctcgaacacggcgcccacatcatcgtcggcacgccggggcgcatc
cagcagcatctgcgcaagggctcgctggtgctcgacggcctcaatacgctgattctcgac
gaagccgatcgcatgctcgacatgggcttctacgacgccattgaagacatcatccagcag
accccggaacgccgccagacactgctgttctccgccacctacccggtgggcatcaagcag
ctagcctccaagttcatgcgtgacccacagcaagtgaaggccgaggcgttccactccgac
gcgcagatcgagcagcgtttctacgagatttcgcccgaggagcgcatggacgcggtggtc
aaggtcctggcgcatttccgtccggcttcttgcgtggcgttctgcttcaccaagcagcag
gtccaggaaaccgtcgatcacctgacgtccaagggcatctccgccgtcggcctgcacggc
gaccttgaacaacgcgaccgcgaccaggtgctggcgatgttcgccaaccgcagcacttcg
gtgctggtggccaccgacgtggcggcccgcggcctggacatcgatgccctggacatggtg
atcaacgtcgaactggcccgggattcggaaatccacatccaccgcgtcggccgcaccggc
cgcgccggtgagaaaggcatcgccatcagcctggtggcgccgtccgaagcccaccgcgcc
caggctatcgagcaactgcagaagtcgccgctgagctgggaccaactggacaacctcaag
ccccagggcggcggtccgctgctaccagcgatgagcaccctgtgcatcggcgccgggcgc
aaggacaaggtccgccccggtgacatccttggtgccctgaccggcgaggccggcattccc
ggcgcccaggtcggcaagatcgcgatcttcgatttccaggcctacgtggccgtggaacgc
gggatcgccaagcaggcgctgcaacgcctgaacgatggcaagatcaagggtcggtcgttg
cgggtgcggatcctgtaa
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