Pseudomonas alvandae B21-020: LOY40_27175
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Entry
LOY40_27175 CDS
T08625
Name
(GenBank) LysR substrate-binding domain-containing protein
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcas03000
]
LOY40_27175
Transcription factors [BR:
pcas03000
]
Prokaryotic type
Helix-turn-helix
LysR family
LOY40_27175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
UVM72203
LinkDB
All DBs
Position
6024823..6025737
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AA seq
304 aa
AA seq
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MLIDEELTLKKLEVFLAFMRTGNLARAAAELQTSNVSVHRAIHSLESALRCPLFKHEGRN
LTPLESAYVLEERAQKLIQDVIESVRLTREAAGFSAERFKLGSLYSLTVKTVPQLIMGLK
IRRSELNIDLIMGSNIDLLYKLKNMEVDAILVSLDDSVNDPDCEQIQLFSDDIFLATPAD
SPFAQRSEVDLAEVRDETFITLTQGFATHQDGNRVFKQAGFEPKVAMQVNDIFTLLSMVS
SGVGYALLPGRIAAVYENRVKLIPLQEKYRLQQHIGVVFLKAKERDPNLLALLAECRMYA
NRQA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgacgaagaattgaccctgaagaaactcgaggtgttcctggctttcatgcgc
accggtaacctcgcgcgggcggcggccgagttgcagaccagtaacgtcagcgtgcaccgg
gccattcattcgctggagagcgccctgcgttgcccgttgttcaagcacgagggccgcaac
ctcacccccttggaaagcgcctatgtgctggaagagcgagcgcagaaactgatccaggac
gtgatcgaaagcgtgcgcctgacccgcgaggcggctggtttttccgccgagcgcttcaag
cttggctcgctgtactcgctgacggtcaagaccgtgccgcagctgatcatgggcctgaag
atccgccgcagcgaactcaatatcgacctgatcatgggttcgaacatcgacctcctgtac
aagctcaagaacatggaagtcgatgcgatcctggtgtcgctggacgacagcgtcaacgac
ccggactgcgaacagatccagctgttttccgatgacatcttccttgccacgccggccgac
tcacccttcgcccagcgcagcgaagtcgacctggccgaagtgcgcgacgaaaccttcatc
accctgacccagggcttcgccacgcaccaggacggcaatcgggtgttcaagcaggcgggg
ttcgagccgaaggtggcgatgcaggtcaacgatatctttaccctgctgagcatggtcagt
tccggggtgggttatgccctgctgccgggcaggatcgcggcggtgtatgaaaaccgggtg
aaactgatcccgttgcaggaaaagtaccggttgcagcagcacatcggtgtggtgttcctc
aaggccaaggaacgcgacccgaacctgctggcgctattggcggagtgccggatgtatgcc
aatcgccaggcttga
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