Pseudomonas alvandae B21-020: LOY40_28445
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Entry
LOY40_28445 CDS
T08625
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LOY40_28445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcas03400
]
LOY40_28445
Enzymes [BR:
pcas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LOY40_28445
DNA repair and recombination proteins [BR:
pcas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LOY40_28445
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
CbiK
Motif
Other DBs
NCBI-ProteinID:
UVM72446
LinkDB
All DBs
Position
6280886..6281665
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AA seq
259 aa
AA seq
DB search
MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDAAFQLDGYFLYACDA
EVPAQGGVALYSRLQPKAVINGLGFETADRYGRYLQADFDKVSIATLLLPSGQNGDEDLN
QKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPERAWMDE
IIGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcatcagtgtgaacgtcaatggtattcaggctgcagtcgagcgtggtttgctc
agttggctgcaagcacagaatgccgacgtcatctgcctgcaggacacccgcgcctccgcc
tttgaactggacgatgcagccttccaactggatggttacttcctttatgcctgcgatgcc
gaagtccccgcccagggtggcgtggctctgtactcgcggctgcaaccgaaggctgtcatc
aacggtctcggtttcgagacggcggaccgctacgggcgctacctgcaagccgatttcgac
aaggtcagcatcgcgaccttactgctcccatcggggcagaacggcgatgaagatttgaat
cagaaattcaagttgatggacgacttcgcccgttaccttgataaacagcggcgcaaacgt
cgcgagtacatctactgtggctcgctgtacgtggcgcaacagaagctggatatcaagaac
tggcgcgacagccagcaatctcctggtttcctggcgccggaacgggcctggatggacgag
atcattggcaacatgggttatgtcgacgccctgcgtgaagtcagccgcgaaggcgaccag
tacagctggtggccggacaacgagcaggccgagatgctcaacctcggctggcgtttcgac
taccagttgctgacgcctgggctgcgccgcttcgtacgcagcgcccgcctgccgcgccaa
ccacgattctcgcagcatgcgccgctgatcgtggactacgactggacgttgacgatctaa
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