Pseudomonas alvandae B21-020: LOY40_28600
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Entry
LOY40_28600 CDS
T08625
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
KO
K11901
type VI secretion system protein ImpB
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LOY40_28600 (tssB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcas02044
]
LOY40_28600 (tssB)
Secretion system [BR:
pcas02044
]
Type VI secretion system
Imp/Vas secretion system core components
LOY40_28600 (tssB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VipA
HTH_NPRL3
Motif
Other DBs
NCBI-ProteinID:
UVM72475
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All DBs
Position
6317408..6317923
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AA seq
171 aa
AA seq
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MAKQSSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVMADLAGKPAEPLAPVADRK
FLEIDVDNFDSRLKAMQPRVAFHVPNELTGEGNLSLDLTFESMDDFSPAAVARKVDSLNK
LLEARTQLANLLTYMDGKTGAEEIIMKAIKDPALLQALASAPKPADAEPKA
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaagcaaagttctcagaaattcatcgcgcgcaatcgcgcgcctcgagtgcagatc
gagtacgacgtcgagctctacggcgccgagaaaaaggtccagttgcccttcgtcatgggc
gtcatggccgacctcgccggcaagcccgccgagcctctggcaccggtggccgatcgcaag
ttcctcgagatcgacgtcgacaatttcgactcgcgcctcaaggccatgcagccgcgcgtg
gcgttccatgtgcctaacgaactgaccggcgaaggcaacctgagcctggacctgaccttc
gaaagcatggacgacttcagcccggcagccgtggcgcgcaaggtcgattcgctgaacaag
ctgctcgaagcgcgcactcagttggccaacctgctgacctacatggacggcaagaccggc
gccgaggaaatcatcatgaaggcgatcaaggacccagcgctgttgcaggccctggcgagc
gcgccgaagcccgccgacgcagagcccaaggcttaa
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